RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 OR10G8Q8NGN5 311 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 CEACAM18A8MTB9 384 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 TMEM14DPA8MWL7 114 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 P01737 135 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 SCTP09683 121 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 EIF4E3Q8N5X7 224 aaKnown RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 STARD4Q96DR4 205 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 NPAS1Q99742 590 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 HDHD3Q9BSH5 251 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 SCNM1Q9BWG6 230 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 NAT8BQ9UHF3 227 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 DLL1O00548 723 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 MFNGO00587 321 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 HYPMO75409 117 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 OR2A4O95047 310 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 IGSF11Q5DX21 431 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 OR2A7Q96R45 310 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 METTL26Q96S19 204 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 SMPD2O60906 423 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 HIST1H3AP68431 136 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 ACSF3Q4G176 576 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 RNASE6Q93091 150 aaKnown RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 NRIP2Q9BQI9 281 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 CLEC7AQ9BXN2 247 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 SDK2Q58EX2 2172 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 BMPR1BO00238 502 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 FCN1O00602 326 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 PGLYRP1O75594 196 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 RBPMS2Q6ZRY4 209 aaKnown RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 ABHD17AQ96GS6 310 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF488Q96MN9 340 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF552Q9H707 407 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 DOK5Q9P104 306 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 METTL1Q9UBP6 276 aaKnown RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 CD74P04233 296 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 RFPL3SP0C7P2 107 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 AMTP48728 403 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 LHX2P50458 406 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 SUCLG1P53597 346 aaKnown RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 HOXA4Q00056 320 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-202ENST00000360093 ABLIM2Q6H8Q1 611 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 OR2T10Q8NGZ9 312 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 WDYHV1Q96HA8 205 aa4.17□□□□□ -1.74
SCN3A-202ENST00000360093 CD40P25942 277 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ATP5J2P56134 94 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 HSPE1P61604 102 aaKnown RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ZNF146Q15072 292 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 TMEM88Q6PEY1 159 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 PRSS3P2Q8NHM4 247 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 FAM210BQ96KR6 192 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 P2RX4Q99571 388 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 PLSCR2Q9NRY7 297 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 CACNA1DQ01668 2161 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 hCG_38984A0A1B0GV85 526 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 MEX3AA1L020 520 aaKnown RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 HIST1H1BP16401 226 aaKnown RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 COL8A1P27658 744 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 MEF2CQ06413 473 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 OVCH2Q7RTZ1 564 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ABHD12Q8N2K0 398 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 FGFRL1Q8N441 504 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 C5orf17Q8NAS9 161 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 MEGF10Q96KG7 1140 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 RHOVQ96L33 236 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 REPIN1Q9BWE0 567 aaKnown RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 RCC2Q9P258 522 aaKnown RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 TMEM218A2RU14 115 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 MFSD2BA6NFX1 497 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 IQCF6A8MYZ5 107 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 C9orf172C9J069 976 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ISLRO14498 428 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 IL18BPO95998 194 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 GCSHP23434 173 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 MFAP4P55083 255 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 PAXXQ9BUH6 204 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 AICDAQ9GZX7 198 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 SEMA5BQ9P283 1151 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 CNOT1A5YKK6 2376 aaKnown RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 LOC102723971A0A1B0GUV8 181 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 LINC00862A6NCI5 91 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 THY1P04216 161 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ECSCRQ19T08 205 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 PLAC9Q5JTB6 97 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ATP1A1-AS1Q5TC04 95 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 PQLC2Q6ZP29 291 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ELOVL1Q9BW60 279 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 LYRM2Q9NU23 88 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ARL2-SNX15V9GYD0 113 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 MMP7P09237 267 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 SULT1A2P50226 295 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 RPS11P62280 158 aaKnown RBP eCLIP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 LRRC75AQ8NAA5 344 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 POC1AQ8NBT0 407 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 DYRK2Q92630 601 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 SNRNP40Q96DI7 357 aaKnown RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 AQP10Q96PS8 301 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 QTRT1Q9BXR0 403 aaKnown RBP4.16□□□□□ -1.74
SCN3A-202ENST00000360093 NIT2Q9NQR4 276 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 DOCK8Q8NF50 2099 aa4.16□□□□□ -1.74
SCN3A-202ENST00000360093 ASXL3Q9C0F0 2248 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms