RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SPRY3O43610 288 aa15.82■□□□□ 0.12
RFTN1-201ENST00000334133 SRP19P09132 144 aaKnown RBP15.82■□□□□ 0.12
RFTN1-201ENST00000334133 SLC35E4Q6ICL7 350 aa15.82■□□□□ 0.12
RFTN1-201ENST00000334133 KIAA1456Q9P272 454 aa15.82■□□□□ 0.12
RFTN1-201ENST00000334133 PTPRBP23467 1997 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 NDUFA2O43678 99 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 SCAF4O95104 1147 aaKnown RBP15.81■□□□□ 0.12
RFTN1-201ENST00000334133 CGAP01215 116 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 SLC25A6P12236 298 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 SELLP14151 372 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 TLE4Q04727 773 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 ZNF726P1Q15940 193 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 SMIM21Q3B7S5 101 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 UTF1Q5T230 341 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 SSX9Q7RTT3 188 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 C15orf54Q8N8G6 183 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 URGCP-MRPS24S4R325 110 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 PRDX2P32119 198 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 TNFRSF9Q07011 255 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 ZNF474Q6S9Z5 364 aaPredicted RBP15.81■□□□□ 0.12
RFTN1-201ENST00000334133 LEAP2Q969E1 77 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 MMP24Q9Y5R2 645 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 PKDREJQ9NTG1 2253 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 TM4SF5O14894 197 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 ZG16O60844 167 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 IGLV1-44P01699 117 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 KITLGP21583 273 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 CLDND2Q8NHS1 167 aa15.81■□□□□ 0.12
RFTN1-201ENST00000334133 ZGRF1Q86YA3 2104 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 AHRRA9YTQ3 701 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 C1QTNF9BB2RNN3 333 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 DEFA4P12838 97 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 EDDM3BP56851 147 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 C22orf34Q6ZV56 151 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 C1orf162Q8NEQ5 155 aaPredicted RBP15.8■□□□□ 0.12
RFTN1-201ENST00000334133 RAB39BQ96DA2 213 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 BIN3Q9NQY0 253 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 SLC25A15Q9Y619 301 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 BSNQ9UPA5 3926 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 CEACAM1P13688 526 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 SLC38A11Q08AI6 406 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 ZNF343Q6P1L6 599 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 MOGAT3Q86VF5 341 aa15.8■□□□□ 0.12
RFTN1-201ENST00000334133 IGKV1D-17A0A075B6S4 117 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 RPS23P62266 143 aaKnown RBP15.79■□□□□ 0.12
RFTN1-201ENST00000334133 VKORC1L1Q8N0U8 176 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 OR2V2Q96R30 315 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 RNF212BA8MTL3 300 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 PTAFRP25105 342 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 RAB11AP62491 216 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 ZNF429Q86V71 674 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 GNG12Q9UBI6 72 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 FAM215AQ9Y5M1 114 aa15.79■□□□□ 0.12
RFTN1-201ENST00000334133 HOXB1P14653 301 aaPredicted RBP15.78■□□□□ 0.12
RFTN1-201ENST00000334133 TAGLN2P37802 199 aaKnown RBP15.78■□□□□ 0.12
RFTN1-201ENST00000334133 HBG1P69891 147 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 HBG2P69892 147 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 ZNF787Q6DD87 383 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 C1orf196B1AJZ1 125 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 OR2C1O95371 312 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 RAB5BP61020 215 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 NCR3LG1Q68D85 454 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 DUX4L9Q6RFH8 374 aaPredicted RBP15.78■□□□□ 0.12
RFTN1-201ENST00000334133 RCC1LQ96I51 464 aaKnown RBP15.78■□□□□ 0.12
RFTN1-201ENST00000334133 CD200P41217 278 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 RAB2AP61019 212 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 DEFB108BQ8NET1 73 aa15.78■□□□□ 0.12
RFTN1-201ENST00000334133 LRRC30A6NM36 301 aa15.77■□□□□ 0.12
RFTN1-201ENST00000334133 ZNF891A8MT65 544 aaPredicted RBP15.77■□□□□ 0.12
RFTN1-201ENST00000334133 MT-ND4LP03901 98 aa15.77■□□□□ 0.12
RFTN1-201ENST00000334133 RAB5AP20339 215 aa15.77■□□□□ 0.12
RFTN1-201ENST00000334133 DLK1P80370 383 aa15.77■□□□□ 0.12
RFTN1-201ENST00000334133 CATR1Q13166 79 aa15.77■□□□□ 0.12
RFTN1-201ENST00000334133 LRRC75BQ2VPJ9 315 aa15.77■□□□□ 0.12
RFTN1-201ENST00000334133 GCSAMQ8N6F7 178 aa15.77■□□□□ 0.12
RFTN1-201ENST00000334133 WDR61Q9GZS3 305 aaKnown RBP15.77■□□□□ 0.12
RFTN1-201ENST00000334133 DSCAMO60469 2012 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 KLK10O43240 276 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 PROP1O75360 226 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 IGKV1D-33P01593 117 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 IGKV1-33P01594 117 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 P2RY6Q15077 328 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 RPL39P5Q59GN2 51 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 H2BFWTQ7Z2G1 175 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 HCFC1P51610 2035 aa15.77■□□□□ 0.11
RFTN1-201ENST00000334133 FAM27E3Q08E93 113 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 EIF4EBP1Q13541 118 aaPredicted RBP15.76■□□□□ 0.11
RFTN1-201ENST00000334133 MBNL2Q5VZF2 373 aaKnown RBP15.76■□□□□ 0.11
RFTN1-201ENST00000334133 SP5Q6BEB4 398 aaPredicted RBP15.76■□□□□ 0.11
RFTN1-201ENST00000334133 TMPRSS5Q9H3S3 457 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 RELNP78509 3460 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 A0A1B0GW64 132 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 CEBPZOSA8MTT3 80 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 FCGR3BO75015 233 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 ACAA1P09110 424 aaPredicted RBP15.76■□□□□ 0.11
RFTN1-201ENST00000334133 RHEBQ15382 184 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 ZNF506Q5JVG8 444 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 TAF15Q92804 592 aaKnown RBP eCLIP15.76■□□□□ 0.11
RFTN1-201ENST00000334133 AGMATQ9BSE5 352 aa15.76■□□□□ 0.11
RFTN1-201ENST00000334133 SH3BGRL2Q9UJC5 107 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms