RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SNIP1Q8TAD8 396 aaKnown RBP12.08□□□□□ -0.48
PABPC1-201ENST00000318607 TAF15Q92804 592 aaKnown RBP eCLIP12.08□□□□□ -0.48
PABPC1-201ENST00000318607 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
PABPC1-201ENST00000318607 A0A087WWC5 75 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 IL18BPO95998 194 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 NMSQ5H8A3 153 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 ZNF525Q8N782 197 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 MANBALQ9NQG1 85 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 F2Z2F3 143 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 J3QW42 95 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 SYNGR3O43761 229 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 SSR4P51571 173 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 UCP2P55851 309 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 HAPLN4Q86UW8 402 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 SSC4DQ8WTU2 575 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 ABHD14BQ96IU4 210 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 SRD5A3Q9H8P0 318 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 DEPPQ9NTK1 212 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 NAGKQ9UJ70 344 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 PLXNB1O43157 2135 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 LOC102725191A0A1B0GVB3 256 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 HPRT1P00492 218 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 IER3P46695 156 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 ZFP36L1Q07352 338 aaKnown RBP12.07□□□□□ -0.48
PABPC1-201ENST00000318607 LINC00696Q6ZRV3 163 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 WNT10AQ9GZT5 417 aa12.07□□□□□ -0.48
PABPC1-201ENST00000318607 CDIPTO14735 213 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 KITLGP21583 273 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 TNFSF10P50591 281 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 SUMO3P55854 103 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-201ENST00000318607 TMEM211Q6ICI0 200 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 FGFRL1Q8N441 504 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 ZNF114Q8NC26 417 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 PINX1Q96BK5 328 aaKnown RBP12.06□□□□□ -0.48
PABPC1-201ENST00000318607 C19orf25Q9UFG5 118 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-201ENST00000318607 KIR2DS1A0A191URI9 304 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 A0A1W2PQM1 296 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 NXPH2O95156 264 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 IL3RAP26951 378 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 CDKN1AP38936 164 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 KIR2DS4P43632 304 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 GABRA2P47869 451 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 PNRC1Q12796 327 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-201ENST00000318607 TRA2AQ13595 282 aaKnown RBP eCLIP12.06□□□□□ -0.48
PABPC1-201ENST00000318607 KIR2DS1Q14954 304 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 CPT1CQ8TCG5 803 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 TXN2Q99757 166 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 HES7Q9BYE0 225 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 OR2D2Q9H210 308 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 CISD1Q9NZ45 108 aaKnown RBP12.06□□□□□ -0.48
PABPC1-201ENST00000318607 OR2W1Q9Y3N9 320 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 OR3A1P47881 315 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 KCNIP4Q6PIL6 250 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 ZNF826PQ6ZT77 177 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 PPP1R14DQ9NXH3 145 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 MED13Q9UHV7 2174 aa12.06□□□□□ -0.48
PABPC1-201ENST00000318607 IGKV1-5P01602 117 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 CELA3AP09093 270 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 PPP1CBP62140 327 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 FXYD3Q14802 87 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 TUSC5Q8IXB3 177 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 NHLRC2Q8NBF2 726 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 OR10P1Q8NGE3 313 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 CMTM2Q8TAZ6 248 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 MDFIC2A0A1B0GVS7 189 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 HRASP01112 189 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 CD46P15529 392 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 UCP1P25874 307 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 ALKBH6Q3KRA9 238 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 ARSJQ5FYB0 599 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-201ENST00000318607 OR52L2PQ8NGH6 319 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 RAB40CQ96S21 281 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 TMEM208Q9BTX3 173 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 hCG_38984A0A1B0GV85 526 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 IGKV1-39P01597 117 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 IGKV1D-39P04432 117 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 TCTAP57738 103 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 FOXO1Q12778 655 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 FAM19A2Q8N3H0 131 aa12.05□□□□□ -0.48
PABPC1-201ENST00000318607 POLR3KQ9Y2Y1 108 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-201ENST00000318607 FCN1O00602 326 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 NXPH1P58417 271 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 RAB30Q15771 203 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 LRTM2Q8N967 370 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 MRGPRDQ8TDS7 321 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 TMEM56Q96MV1 263 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 C2orf88Q9BSF0 95 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 DCTN5Q9BTE1 182 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 WDR61Q9GZS3 305 aaKnown RBP12.04□□□□□ -0.48
PABPC1-201ENST00000318607 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 TMEM56-RWDD3S4R434 201 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 ABCA4P78363 2273 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 A0A1W2PR77 199 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 B4DEV8 164 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 KBTBD11O94819 623 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 PFN1P07737 140 aaKnown RBP12.04□□□□□ -0.48
PABPC1-201ENST00000318607 MGST1P10620 155 aaKnown RBP12.04□□□□□ -0.48
PABPC1-201ENST00000318607 LIFP15018 202 aa12.04□□□□□ -0.48
PABPC1-201ENST00000318607 MRPL54Q6P161 138 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms