RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 OR2C3Q8N628 320 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 OR5D14Q8NGL3 314 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 NKX2-4Q9H2Z4 354 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 UBE2ZQ9H832 354 aaPredicted RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 TAS2R4Q9NYW5 299 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 SPTY2D1-AS1A0A0U1RR47 76 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 FAM24AA6NFZ4 105 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 FAM87AP0C7U9 286 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 HIST1H1DP16402 221 aaKnown RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF17P17021 662 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 PMCHP20382 165 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 THBS3P49746 956 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 GRB2P62993 217 aaKnown RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 MRPS34P82930 218 aaKnown RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 FOXL1Q12952 345 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 CDCP2Q5VXM1 449 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 SLC25A47Q6Q0C1 308 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 C19orf35Q6ZS72 473 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 KCNS1Q96KK3 526 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 AP1S3Q96PC3 154 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 BOKQ9UMX3 212 aaPredicted RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 POLR1DQ9Y2S0 133 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 SELENOKQ9Y6D0 94 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 SAA2-SAA4A0A096LPE2 208 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 LOC107986453A0A1B0GWG9 222 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 A0A1W2PP55 124 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 IGSF23A1L1A6 192 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 PSMB11A5LHX3 300 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 SHISA7A6NL88 538 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 H0YJW9 148 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 F2RL2O00254 374 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF728P0DKX0 622 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 FMODQ06828 376 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 CRIP3Q6Q6R5 217 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF562Q6V9R5 426 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF296Q8WUU4 475 aaPredicted RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 RTN4IP1Q8WWV3 396 aaPredicted RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 PP6455Q8WZ26 134 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 NINJ1Q92982 152 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 GALMQ96C23 342 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 RAB1BQ9H0U4 201 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 MRPL18Q9H0U6 180 aaKnown RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 PNRC2Q9NPJ4 139 aaKnown RBP5.66□□□□□ -1.5
ZNF540-201ENST00000316433 JKAMPQ9P055 326 aa5.66□□□□□ -1.5
ZNF540-201ENST00000316433 A0A1W2PPV4 95 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 TMEM189A5PLL7 270 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 ANKRD30BLA7E2S9 258 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 SHISA8B8ZZ34 492 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 TMEM250H0YL14 139 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 TNFRSF13BO14836 293 aaPredicted RBP5.65□□□□□ -1.5
ZNF540-201ENST00000316433 SLC31A1O15431 190 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 VENTXO95231 258 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 CA2P00918 260 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 LINC00869P0C866 280 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 GATA2P23769 480 aaPredicted RBP5.65□□□□□ -1.5
ZNF540-201ENST00000316433 PTGER1P34995 402 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 NKX2-1P43699 371 aaPredicted RBP5.65□□□□□ -1.5
ZNF540-201ENST00000316433 PPOXP50336 477 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 ARF1P84077 181 aaKnown RBP5.65□□□□□ -1.5
ZNF540-201ENST00000316433 MEF2BQ02080 365 aaPredicted RBP5.65□□□□□ -1.5
ZNF540-201ENST00000316433 HIST1H1AQ02539 215 aaPredicted RBP5.65□□□□□ -1.5
ZNF540-201ENST00000316433 GAGE5Q13069 117 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 GAGE6Q13070 117 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 MEP1BQ16820 701 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 C1orf140Q5VVS0 124 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 DOK3Q7L591 496 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 OR5AS1Q8N127 324 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 OR5A1Q8NGJ0 315 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 OR5C1Q8NGR4 320 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 OR10X1Q8NGY0 326 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 OR4C3Q8NH37 302 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 PLPPR1Q8TBJ4 325 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 MBD3L1Q8WWY6 194 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 BORCS7Q96B45 105 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 TSSK2Q96PF2 358 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 GPER1Q99527 375 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 TP73-AS1Q9UF72 201 aa5.65□□□□□ -1.5
ZNF540-201ENST00000316433 CRYM-AS1A6NIL9 109 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.65□□□□□ -1.51
ZNF540-201ENST00000316433 SDCBPO00560 298 aaPredicted RBP5.65□□□□□ -1.51
ZNF540-201ENST00000316433 AGFG2O95081 481 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 CELA3AP09093 270 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 VSIG8P0DPA2 414 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 GP1BBP13224 206 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 AMY2BP19961 511 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 CBLN1P23435 193 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 SSTR5P35346 364 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 FUT6P51993 359 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 FBXW4P57775 412 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 RHOBP62745 196 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 LCN12Q6JVE5 192 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 MRPL54Q6P161 138 aaKnown RBP5.65□□□□□ -1.51
ZNF540-201ENST00000316433 HAPLN4Q86UW8 402 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 DOLPP1Q86YN1 238 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 C2orf73Q8N5S3 287 aaPredicted RBP5.65□□□□□ -1.51
ZNF540-201ENST00000316433 OR2K2Q8NGT1 345 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 ZNF418Q8TF45 676 aaPredicted RBP5.65□□□□□ -1.51
ZNF540-201ENST00000316433 RNF183Q96D59 192 aa5.65□□□□□ -1.51
ZNF540-201ENST00000316433 C5orf30Q96GV9 206 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms