RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 TMEM262E9PQX1 116 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 DHHO43323 396 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 FAHP16930 419 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 SOX8P57073 446 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 LOC107986453A0A1B0GWG9 222 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 F8VVB4 439 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 F8VWA3 439 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 J3QW42 95 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 TSPOP30536 169 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 BIVMQ86UB2 503 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 OR10G4Q8NGN3 311 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 OR10G9Q8NGN4 311 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 OR10G7Q8NGN6 311 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 UFC1Q9Y3C8 167 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 M0R1B8 84 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 MRGPREQ86SM8 312 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 LINC01551Q86U37 167 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
LEMD3-201ENST00000308330 TSSC4Q9Y5U2 329 aaPredicted RBP13.29□□□□□ -0.28
LEMD3-201ENST00000308330 DOCK8Q8NF50 2099 aa13.29□□□□□ -0.28
LEMD3-201ENST00000308330 OR4C46A6NHA9 309 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 B5MCH6 92 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 PAGE4O60829 102 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 B4GALT1P15291 398 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 UCNP55089 124 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 CEACAM16Q2WEN9 425 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 SLC23A3Q6PIS1 610 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 TMEM70Q9BUB7 260 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 SAP30LQ9HAJ7 183 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 TUBGCP6Q96RT7 1819 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 A0A0U1RQV5 110 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 HSPB6O14558 160 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 LINC00869P0C866 280 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 ERVK-16P61578 105 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 ARL16Q0P5N6 197 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 OTPQ5XKR4 325 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 PIGTQ969N2 578 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 TXNIPQ9H3M7 391 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 LRRC30A6NM36 301 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 PPIHO43447 177 aaKnown RBP13.28□□□□□ -0.28
LEMD3-201ENST00000308330 PCBP3P57721 371 aaKnown RBP13.28□□□□□ -0.28
LEMD3-201ENST00000308330 ZNF117Q03924 483 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 FDX2Q6P4F2 183 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 MRPL24Q96A35 216 aaKnown RBP13.28□□□□□ -0.28
LEMD3-201ENST00000308330 SGK494Q96LW2 274 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 WDR54Q9H977 334 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 MRPS16Q9Y3D3 137 aaKnown RBP13.28□□□□□ -0.28
LEMD3-201ENST00000308330 DOPEY2Q9Y3R5 2298 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 ALG1L2C9J202 215 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 SRIP30626 198 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 POC1AQ8NBT0 407 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 HEYLQ9NQ87 328 aaPredicted RBP13.28□□□□□ -0.28
LEMD3-201ENST00000308330 GNG12Q9UBI6 72 aa13.28□□□□□ -0.28
LEMD3-201ENST00000308330 C5orf49A4QMS7 147 aa13.27□□□□□ -0.28
LEMD3-201ENST00000308330 MSGN1A6NI15 193 aa13.27□□□□□ -0.28
LEMD3-201ENST00000308330 HLA-DQA1P01909 254 aa13.27□□□□□ -0.28
LEMD3-201ENST00000308330 CSN3P07498 182 aa13.27□□□□□ -0.28
LEMD3-201ENST00000308330 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.28
LEMD3-201ENST00000308330 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.28
LEMD3-201ENST00000308330 ZNF501Q96CX3 271 aaPredicted RBP13.27□□□□□ -0.28
LEMD3-201ENST00000308330 GREB1LQ9C091 1923 aaPredicted RBP13.27□□□□□ -0.28
LEMD3-201ENST00000308330 TRBV5-3A0A0A0MS03 114 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 IGHV2OR16-5A0A0B4J2B6 119 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 FAM90A27PA6NNH2 459 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 EDDM3BP56851 147 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 C1orf174Q8IYL3 243 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 VWCEQ96DN2 955 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 LRRC3CA6NJW4 275 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 APOMO95445 188 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 RTL8BQ17RB0 113 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 ARHGEF39Q8N4T4 335 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 DEFB108BQ8NET1 73 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 OR51H1Q8NH63 302 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 RAB40CQ96S21 281 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 SLC22A13Q9Y226 551 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 MPV17L2Q567V2 206 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 CBLN3Q6UW01 205 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 LYG1Q8N1E2 194 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 TMEM105Q8N8V8 129 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 NAA60Q9H7X0 242 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 HIF1ANQ9NWT6 349 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 HS3ST3B1Q9Y662 390 aa13.27□□□□□ -0.29
LEMD3-201ENST00000308330 M0R135 149 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 HYAL3O43820 417 aaPredicted RBP13.26□□□□□ -0.29
LEMD3-201ENST00000308330 RELBQ01201 579 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 HIST1H1AQ02539 215 aaPredicted RBP13.26□□□□□ -0.29
LEMD3-201ENST00000308330 ZNF799Q96GE5 643 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 SIRT4Q9Y6E7 314 aaPredicted RBP13.26□□□□□ -0.29
LEMD3-201ENST00000308330 PRSS37A4D1T9 235 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 KBTBD11O94819 623 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 CBLN1P23435 193 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 CSRP2Q16527 193 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 CD300EQ496F6 205 aaPredicted RBP13.26□□□□□ -0.29
LEMD3-201ENST00000308330 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.26□□□□□ -0.29
LEMD3-201ENST00000308330 LHFPL4Q7Z7J7 247 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 TIMD4Q96H15 378 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 A0A1W2PR77 199 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 GAGE12HA6NDE8 117 aa13.26□□□□□ -0.29
LEMD3-201ENST00000308330 ATXN7O15265 892 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms