RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 WNT5BQ9H1J7 359 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 ELOVL5Q9NYP7 299 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 C17orf51A8MQB3 221 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 PIKFYVEQ9Y2I7 2098 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 ISLRO14498 428 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 PLA2G10O15496 165 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 GPHA2Q96T91 129 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 MMD2Q8IY49 270 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 LINC00869P0C866 280 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 ZNF79Q15937 498 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 LGALSLQ3ZCW2 172 aaPredicted RBP14.85□□□□□ -0.03
SHANK1-201ENST00000293441 SCARF2Q96GP6 870 aaPredicted RBP14.85□□□□□ -0.03
SHANK1-201ENST00000293441 SCNM1Q9BWG6 230 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 RTN4RQ9BZR6 473 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 PKIBQ9C010 78 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 PITPNC1Q9UKF7 332 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 FCGR2BP31994 310 aaPredicted RBP14.85□□□□□ -0.03
SHANK1-201ENST00000293441 FAM74A3Q4VXF1 159 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 MRPL30Q8TCC3 161 aaKnown RBP14.85□□□□□ -0.03
SHANK1-201ENST00000293441 FAM206AQ9NX38 181 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 WNT9BO14905 357 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 SNURFLB1AK76 121 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 ISG15P05161 165 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 CELA3AP09093 270 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 RFPL3SP0C7P2 107 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 RPL29P47914 159 aaKnown RBP14.85□□□□□ -0.03
SHANK1-201ENST00000293441 ELOBQ15370 118 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 FUT9Q9Y231 359 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 RUNX1Q01196 453 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 CD300CQ08708 224 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 PNKDQ8N490 385 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 OR4B1Q8NGF8 309 aa14.85□□□□□ -0.03
SHANK1-201ENST00000293441 ATP5G2Q06055 141 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 TMEM189A5PLL7 270 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 CORTO00230 105 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 CD1AP06126 327 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 C11orf91Q3C1V1 193 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 DCAF12L2Q5VW00 463 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 C5orf52A6NGY3 159 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 CBY3A6NI87 242 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 SUCLG1P53597 346 aaKnown RBP14.84□□□□□ -0.03
SHANK1-201ENST00000293441 RSG1Q9BU20 258 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 IL19Q9UHD0 177 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 WNK3Q9BYP7 1800 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 PGLYRP1O75594 196 aaPredicted RBP14.84□□□□□ -0.03
SHANK1-201ENST00000293441 RECKO95980 971 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 TRBV5-5A0A0J9YX44 114 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 H3BQ15 152 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 CEACAM1P13688 526 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 DLX1P56177 255 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 VAX1Q5SQQ9 334 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 TMEM191AQ9H0A3 160 aa14.84□□□□□ -0.03
SHANK1-201ENST00000293441 B9A039 149 aa14.83□□□□□ -0.03
SHANK1-201ENST00000293441 PF4P02776 101 aa14.83□□□□□ -0.03
SHANK1-201ENST00000293441 LIPFP07098 398 aa14.83□□□□□ -0.03
SHANK1-201ENST00000293441 FAM27E3Q08E93 113 aa14.83□□□□□ -0.03
SHANK1-201ENST00000293441 LAMTOR1Q6IAA8 161 aa14.83□□□□□ -0.03
SHANK1-201ENST00000293441 MFAP4P55083 255 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 TMEM54Q969K7 222 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 B4DEV8 164 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 SSTR5P35346 364 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 GLIPR1P48060 266 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 DUX5Q96PT3 197 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 GDF9O60383 454 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 NPBWR2P48146 333 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 RIPPLY2Q5TAB7 128 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 C9orf62Q8N4C0 152 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 DDB2Q92466 427 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 TMEM56-RWDD3S4R434 201 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 CKAP5Q14008 2032 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 TMEM218A2RU14 115 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 APOBEC3AP31941 199 aaPredicted RBP14.83□□□□□ -0.04
SHANK1-201ENST00000293441 FAM106AQ4KMX7 169 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 SYT8Q8NBV8 401 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 ANGPTL6Q8NI99 470 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 RHOVQ96L33 236 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 CLEC7AQ9BXN2 247 aa14.83□□□□□ -0.04
SHANK1-201ENST00000293441 LYRM2Q9NU23 88 aaPredicted RBP14.83□□□□□ -0.04
SHANK1-201ENST00000293441 FAM181BA6NEQ2 426 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 CEBPEQ15744 281 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 ABHD17AQ96GS6 310 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 OR5AC2Q9NZP5 309 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 HSPB8Q9UJY1 196 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 IGKV1D-42A0A075B6H8 117 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 DNAJC13O75165 2243 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 VSIG10L2P0DP72 767 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 RND2P52198 227 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 VKORC1L1Q8N0U8 176 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 RALYQ9UKM9 306 aaKnown RBP14.82□□□□□ -0.04
SHANK1-201ENST00000293441 OTOFQ9HC10 1997 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 DSPPQ9NZW4 1301 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 IGKV3D-11A0A0A0MRZ8 115 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 GCM2O75603 506 aaPredicted RBP14.82□□□□□ -0.04
SHANK1-201ENST00000293441 THY1P04216 161 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 IGKV3-11P04433 115 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 NCMAPQ5T1S8 102 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 CTHRC1Q96CG8 243 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 TMEM222Q9H0R3 208 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 FOXH1O75593 365 aa14.82□□□□□ -0.04
SHANK1-201ENST00000293441 DPPA3Q6W0C5 159 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms