RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PRR30Q53SZ7 412 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 FAM213BQ8TBF2 198 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 C14orf79Q96F83 325 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 YPEL2Q96QA6 119 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 APC2O95996 2303 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 ACACAQ13085 2346 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 DPRXA6NFQ7 191 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 C1QL1O75973 258 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 S1PR2O95136 353 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 SNAPINO95295 136 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 SFTA3P0C7M3 94 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 IRF2P14316 349 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 GPR12P47775 334 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 TMPRSS3P57727 454 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 TAGLNQ01995 201 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 ZNF273Q14593 569 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 GUCA2BQ16661 112 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 Q8TCH9 128 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 CD300LFQ8TDQ1 290 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 AGMATQ9BSE5 352 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 KCNJ16Q9NPI9 418 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 ANKRD11Q6UB99 2663 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 F2RL2O00254 374 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 CLDN14O95500 239 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 FAM87AP0C7U9 286 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 P0C879 139 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 UBE2KP61086 200 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 HBG1P69891 147 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 HBG2P69892 147 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 TNFRSF9Q07011 255 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 BSPH1Q075Z2 132 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 PEA15Q15121 130 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 FAM201AQ5SY85 155 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 SLC25A24Q6NUK1 477 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 RAI1Q7Z5J4 1906 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 PUSL1Q8N0Z8 303 aaKnown RBP10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 LFNGQ8NES3 379 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 RND1Q92730 232 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 SDSLQ96GA7 329 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 DIRC2Q96SL1 478 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 DYSFO75923 2080 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 DSCAMO60469 2012 aa10.75□□□□□ -0.69
SPTLC1-201ENST00000262554 LINC00473A8K010 186 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 DNASE2O00115 360 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 RAB29O14966 203 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 NUPL2O15504 423 aaKnown RBP10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 GFRA3O60609 400 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 CYB5R3P00387 301 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 THBDP07204 575 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 TNFRSF1AP19438 455 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 BRWD1-AS2P59051 145 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 GUK1Q16774 197 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 STUMQ69YW2 141 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 H2BFWTQ7Z2G1 175 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 RBKSQ9H477 322 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 ZNF665Q9H7R5 613 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 CALYQ9NYX4 217 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 HSPB7Q9UBY9 170 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 TANC2Q9HCD6 1990 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 LRRC30A6NM36 301 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 OR4A8P0C604 315 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 METTL15P1P0C7V9 234 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 UCNP55089 124 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 LOXL3P58215 753 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 NHLH1Q02575 133 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 ADIPOQQ15848 244 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 SPANXN5Q5MJ07 72 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 AKR1C8PQ5T2L2 129 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 SCGB1C1Q8TD33 95 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 PBDC1Q9BVG4 233 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 EIF5A2Q9GZV4 153 aaKnown RBP10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 FAM234AQ9H0X4 552 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 RFNGQ9Y644 331 aa10.74□□□□□ -0.69
SPTLC1-201ENST00000262554 DIDO1Q9BTC0 2240 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 TRGV10A0A0A0MS01 117 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 VSTM5A8MXK1 200 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 RNF223E7ERA6 249 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 CD55P08174 381 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 SELLP14151 372 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 DUTP33316 252 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 RUNX1Q01196 453 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 LINC01559Q495D7 138 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 DPPA3Q6W0C5 159 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 LILRB2Q8N423 598 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 DEFB108BQ8NET1 73 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 PLPPR2Q96GM1 343 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 GAFA1Q96PS6 74 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 NGBQ9NPG2 151 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 DSCAML1Q8TD84 2053 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 USF3Q68DE3 2245 aa10.73□□□□□ -0.69
SPTLC1-201ENST00000262554 MED19A0JLT2 244 aaPredicted RBP10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 FAM74A7A6NL05 159 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 C17orf100A8MU93 164 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 CGB3P0DN86 165 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 CGB7P0DN87 165 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 RAB7AP51149 207 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 CCL8P80075 99 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 FAM74A3Q4VXF1 159 aa10.72□□□□□ -0.69
SPTLC1-201ENST00000262554 TEX36Q5VZQ5 186 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms