RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ADAM10O14672 748 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 RCC1P18754 421 aaPredicted RBP11.87□□□□□ -0.51
CDH1-201ENST00000261769 RBPMS2Q6ZRY4 209 aaKnown RBP11.87□□□□□ -0.51
CDH1-201ENST00000261769 ALX4Q9H161 411 aaPredicted RBP11.87□□□□□ -0.51
CDH1-201ENST00000261769 IGKV1D-43A0A0B4J1Z2 117 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 SLC25A17O43808 307 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 NPBWR2P48146 333 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 FAM78BQ5VT40 261 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 HSD17B13Q7Z5P4 300 aaPredicted RBP11.87□□□□□ -0.51
CDH1-201ENST00000261769 RTN4RL2Q86UN3 420 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 V9GYH0 126 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 V9GYS6 101 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 ESPL1Q14674 2120 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 NYNRINQ9P2P1 1898 aaKnown RBP11.87□□□□□ -0.51
CDH1-201ENST00000261769 THBDP07204 575 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 C10orf113Q5VZT2 155 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 LAMTOR1Q6IAA8 161 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 ZNF837Q96EG3 531 aaPredicted RBP11.87□□□□□ -0.51
CDH1-201ENST00000261769 ZDHHC11Q9H8X9 412 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 PPP1R2P9O14990 202 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 HIST1H1EP10412 219 aaKnown RBP11.86□□□□□ -0.51
CDH1-201ENST00000261769 CA7P43166 264 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 DYNLT3P51808 116 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 SELENOTP62341 195 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 CLEC5AQ9NY25 188 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 URGCP-MRPS24S4R325 110 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 SPNP16150 400 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 ZNF680Q8NEM1 530 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 VSIG4Q9Y279 399 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 SIP14410 1827 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 MYO7BQ6PIF6 2116 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 TGOLN2O43493 480 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 PPOXP50336 477 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 STPG3Q8N7X2 389 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 BTN1A1Q13410 526 aa11.86□□□□□ -0.51
CDH1-201ENST00000261769 CXorf66Q5JRM2 361 aaPredicted RBP11.86□□□□□ -0.51
CDH1-201ENST00000261769 OR2A4O95047 310 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 IGHG3P01860 377 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 NDUFA6P56556 154 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 B2MP61769 119 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 OR2A7Q96R45 310 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 HMSDA8MTL9 139 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 TMEM14DPA8MWL7 114 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 PIN1P1O15428 100 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 OR2C1O95371 312 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 CELA3BP08861 270 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 CRYBA2P53672 197 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 PIP4P1Q86T03 277 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 SSMEM1Q8WWF3 244 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 IGHV3OR16-10A0A075B7F0 116 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 WNT9BO14905 357 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 HYPMO75409 117 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 GNG4P50150 75 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 FOXF2Q12947 444 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 GUCA2BQ16661 112 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 CABLES2Q9BTV7 478 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 MRPL37Q9BZE1 423 aaKnown RBP11.85□□□□□ -0.51
CDH1-201ENST00000261769 RTN4RQ9BZR6 473 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 NAGKQ9UJ70 344 aa11.85□□□□□ -0.51
CDH1-201ENST00000261769 POLEQ07864 2286 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 COL4A6Q14031 1691 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 DOCK4Q8N1I0 1966 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 ADAM11O75078 769 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 PF4P02776 101 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 GGNQ86UU5 652 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 METTL26Q96S19 204 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 TLNRD1Q9H1K6 362 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 NPVFQ9HCQ7 196 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 MDC1Q14676 2089 aaKnown RBP11.84□□□□□ -0.51
CDH1-201ENST00000261769 MBD3L4A6NDZ8 208 aaPredicted RBP11.84□□□□□ -0.51
CDH1-201ENST00000261769 MBD3L3A6NE82 208 aaPredicted RBP11.84□□□□□ -0.51
CDH1-201ENST00000261769 MBD3L5A6NJ08 208 aaPredicted RBP11.84□□□□□ -0.51
CDH1-201ENST00000261769 F5H697 171 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 HLA-DQB1P01920 261 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 KIR2DL2P43627 348 aaPredicted RBP11.84□□□□□ -0.51
CDH1-201ENST00000261769 MFAP4P55083 255 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
CDH1-201ENST00000261769 FAM216BQ8N7L0 139 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 MBD3L2Q8NHZ7 208 aaPredicted RBP11.84□□□□□ -0.51
CDH1-201ENST00000261769 TRAV30A0A087WSZ9 112 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 PHYHIPLQ96FC7 376 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 TMEM222Q9H0R3 208 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 PRR13Q9NZ81 148 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 HIGD1AQ9Y241 93 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 WSB1Q9Y6I7 421 aa11.84□□□□□ -0.51
CDH1-201ENST00000261769 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.51
CDH1-201ENST00000261769 SSC4DQ8WTU2 575 aa11.83□□□□□ -0.51
CDH1-201ENST00000261769 IGHV1-18A0A0C4DH31 117 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 KCNAB3O43448 404 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 C16orf82Q7Z2V1 217 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 LINC00052Q96N35 136 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 TANC1Q9C0D5 1861 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 CEACAM18A8MTB9 384 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 CDRT15L2A8MXV6 281 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 GUK1Q16774 197 aa11.83□□□□□ -0.52
CDH1-201ENST00000261769 MOGAT2Q3SYC2 334 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms