RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ddb2Q99J79 432 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tmem107Q9CPV0 140 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ccr9Q9WUT7 369 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ube2ql1A0PJN4 161 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Smr2O09133 150 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tcn2O88968 430 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Dlx4P70436 240 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Il9rQ01114 468 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm2016Q3TQZ4 144 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 St8sia3Q64689 380 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1341Q7TQV4 312 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ntf4Q80VU4 209 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 9430097D07RikQ8BS47 195 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Poc1aQ8JZX3 405 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1257Q8VGP0 309 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rnf126Q91YL2 313 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Suclg1Q9WUM5 346 aaKnown RBP11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ccpg1osV9GXK1 122 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Col6a3E9PWQ3 3284 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 SvilQ8K4L3 2170 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Igkv6-32A0A140T8N9 115 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Zfp942B8JJA7 486 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm45692D3Z0A0 150 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rbm24D3Z4I3 236 aaKnown RBP11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Nxpe5E0CX47 564 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Yjefn3F6W8I0 251 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Vmn1r80L7N1Z3 308 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Bcl6bO88282 474 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Zfp26P10076 861 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mcpt2P15119 244 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Sirt6P59941 334 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Nxph3Q91VX5 252 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Neurl1Q923S6 574 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rhebl1Q9D8T3 184 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Dchs1E9PVD3 3291 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Enpp7D3Z6V6 446 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Eid2bE9Q2Y0 151 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 C3ar1O09047 477 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Nanos2P60322 136 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 HnrnpkP61979 463 aaKnown RBP11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 UevldQ3U1V6 471 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr222Q7TS30 318 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 SheQ8BSD5 492 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tox4Q8BU11 619 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 4922502D21RikQ8C634 189 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 TskuQ8CBR6 354 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 TbceQ8CIV8 524 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Vmn1r183Q8K3N5 305 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 St8sia6Q8K4T1 398 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr994Q8VF73 314 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Nkain1Q9D035 207 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tsc22d4Q9EQN3 387 aa11.66□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cep290Q6A078 2472 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm45808A0A1B0GSH8 263 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ube2dnl1A2AFH1 155 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Arxes1C0HK79 180 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Arxes2C0HK80 180 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ear14F6YUX7 155 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 G530012D18RikJ3QK25 139 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Arg2O08691 354 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rnase2O35291 155 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Wipf3P0C7L0 485 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 B4galt1P15535 399 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 UcnP81615 122 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cln5Q3UMW8 341 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr324Q5NCC7 333 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Jagn1Q5XKN4 183 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr10Q60883 311 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Vdac2Q60930 295 aaKnown RBP11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cd55bQ61476 407 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rab39bQ8BHC1 213 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm16503Q8C6M9 103 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr860Q8VFF7 317 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Q9CRC3 126 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ube2j1Q9JJZ4 318 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 EdarQ9R187 448 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gpr34Q9R1K6 375 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cxcl15Q9WVL7 167 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rps2-ps6A0A140T8L5 221 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr587-ps1A0A1B0GSS1 159 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Fthl17bA2AHC5 176 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Fthl17cA2AHC6 176 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm7233E9PZI8 198 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Zfp760E9QAF5 666 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm9732F6QVC4 198 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm9772F6XPD8 135 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm8104K7N744 198 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rnd3P61588 244 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Lsm6P62313 80 aaKnown RBP11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Dhrs2Q149L0 282 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Fthl17fQ3SXD2 176 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cln6Q3U466 308 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Nkain3Q3URJ8 181 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Nxph2Q61199 261 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Wdyhv1Q80WB5 209 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mr1Q8HWB0 341 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ntng2Q8R4F1 589 aaKnown RBP11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr339Q8VGK8 309 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 BmfQ91ZE9 185 aa11.65□□□□□ -0.54
Nup88-201ENSMUST00000035283 Acy1Q99JW2 408 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 100.4 ms