RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PGLYRP1O75594 196 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-227ENST00000640957 KBTBD11O94819 623 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 GPM6AP51674 278 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 VASH2Q86V25 355 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 BAGE2Q86Y30 109 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 ZNF573Q86YE8 665 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 SNIP1Q8TAD8 396 aaKnown RBP11.72□□□□□ -0.53
SCARB2-227ENST00000640957 ST8SIA1Q92185 356 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 PLPPR2Q96GM1 343 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 CIB3Q96Q77 187 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-227ENST00000640957 VAMP8Q9BV40 100 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 UBE2ZQ9H832 354 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-227ENST00000640957 GPR27Q9NS67 375 aa11.72□□□□□ -0.53
SCARB2-227ENST00000640957 GLB1P16278 677 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 NXPH1P58417 271 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 TFF3Q07654 80 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 CYP2G1PQ6ZSU1 146 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 ZCCHC14Q8WYQ9 949 aaKnown RBP11.71□□□□□ -0.53
SCARB2-227ENST00000640957 CLN8Q9UBY8 286 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 KRASP01116 189 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 IFI6P09912 130 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 DTYMKP23919 212 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 BAXQ07812 192 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 FFAR4Q5NUL3 377 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 SP5Q6BEB4 398 aaPredicted RBP11.71□□□□□ -0.53
SCARB2-227ENST00000640957 UNQ5815/PRO19632Q6UWF5 114 aa11.71□□□□□ -0.53
SCARB2-227ENST00000640957 PHF7Q9BWX1 381 aaPredicted RBP11.71□□□□□ -0.53
SCARB2-227ENST00000640957 A0A1W2PR77 199 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 CBY3A6NI87 242 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 PATE3B3GLJ2 98 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 TLX3O43711 291 aaPredicted RBP11.71□□□□□ -0.54
SCARB2-227ENST00000640957 SYNGR2O43760 224 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 PMCHP20382 165 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 OR2M3Q8NG83 312 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 OXGR1Q96P68 337 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.54
SCARB2-227ENST00000640957 TMEM242Q9NWH2 141 aa11.71□□□□□ -0.54
SCARB2-227ENST00000640957 DHHO43323 396 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 ZNF32P17041 273 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 ANKRD37Q7Z713 158 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 WDR5BQ86VZ2 330 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 OR10G9Q8NGN4 311 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 OR10G7Q8NGN6 311 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 SPTSSAQ969W0 71 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 CTDSP1Q9GZU7 261 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 PRDM6Q9NQX0 595 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 MRPS17Q9Y2R5 130 aaKnown RBP11.7□□□□□ -0.54
SCARB2-227ENST00000640957 PTRH2Q9Y3E5 179 aaKnown RBP11.7□□□□□ -0.54
SCARB2-227ENST00000640957 ATP23Q9Y6H3 246 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 ZFAND5O76080 213 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 SERPINA7P05543 415 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 CCL7P80098 99 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 CPEB3Q8NE35 698 aaKnown RBP11.7□□□□□ -0.54
SCARB2-227ENST00000640957 ACY3Q96HD9 319 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 TXN2Q99757 166 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 C11orf94C9JXX5 98 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 TNFSF11O14788 317 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 CCL25O15444 150 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 IFNA1P01562 189 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 NTF4P34130 210 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 CXCL12P48061 93 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 RBM11P57052 281 aaKnown RBP11.7□□□□□ -0.54
SCARB2-227ENST00000640957 SLC38A11Q08AI6 406 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 DNLZQ5SXM8 178 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 OR5L2Q8NGL0 311 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 TMEM56Q96MV1 263 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 ASCL3Q9NQ33 180 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 TMEM106BQ9NUM4 274 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 TMEM56-RWDD3S4R434 201 aa11.7□□□□□ -0.54
SCARB2-227ENST00000640957 A0A096LPE4 126 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 A0A1W2PPZ6 126 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 CLEC18AA5D8T8 446 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCARB2-227ENST00000640957 OTX2P32243 289 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 KMT5CQ86Y97 462 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-227ENST00000640957 CLEC18CQ8NCF0 446 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 ZC2HC1AQ96GY0 325 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 NBASA2RRP1 2371 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 KIAA1549Q9HCM3 1950 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 M0QZ24 198 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 IGKV1-39P01597 117 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 IGKV1D-39P04432 117 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 TCL1AP56279 114 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 ZNF816Q0VGE8 651 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-227ENST00000640957 TAF15Q92804 592 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCARB2-227ENST00000640957 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 TMEM9BQ9NQ34 198 aa11.69□□□□□ -0.54
SCARB2-227ENST00000640957 POLEQ07864 2286 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 KIR2DL5BA0A0G2JN68 375 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 KIR2DL5BA0A0G2JPC4 375 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 NTF3P20783 257 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 F2RP25116 425 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 CCKARP32238 428 aa11.68□□□□□ -0.54
SCARB2-227ENST00000640957 IER3P46695 156 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms