RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 PECRQ9BY49 303 aa12.79□□□□□ -0.36
COLCA2-207ENST00000639470 GNB4Q9HAV0 340 aa12.79□□□□□ -0.36
COLCA2-207ENST00000639470 RAB9BQ9NP90 201 aa12.79□□□□□ -0.36
COLCA2-207ENST00000639470 PARP11Q9NR21 331 aa12.79□□□□□ -0.36
COLCA2-207ENST00000639470 SLC23A1Q9UHI7 598 aa12.79□□□□□ -0.36
COLCA2-207ENST00000639470 RNF150Q9ULK6 438 aa12.79□□□□□ -0.36
COLCA2-207ENST00000639470 TMEM272A0A1B0GTI8 110 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 CT45A6P0DMU7 189 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 CT45A5P0DMU8 189 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 CT45A7P0DMV0 189 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 MYCNOSP40205 109 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 HLA-DRB3P79483 266 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 EGFEM1PQ0D2K5 195 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 FOXE3Q13461 319 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 KIAA0141Q14154 515 aaPredicted RBP12.78□□□□□ -0.36
COLCA2-207ENST00000639470 C2orf76Q3KRA6 126 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 DEFB121Q5J5C9 76 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 CXorf66Q5JRM2 361 aaPredicted RBP12.78□□□□□ -0.36
COLCA2-207ENST00000639470 STEAP3Q658P3 488 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 ZNF554Q86TJ5 538 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 FAM89BQ8N5H3 189 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 FBXL15Q9H469 300 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 ZFP57Q9NU63 452 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 ABRACLQ9P1F3 81 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 GAB2Q9UQC2 676 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 KCNK7Q9Y2U2 307 aa12.78□□□□□ -0.36
COLCA2-207ENST00000639470 FCN1O00602 326 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 LDLRAD4O15165 306 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 NBR2O15453 112 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 IGHG4P01861 327 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 VDAC1P21796 283 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 PSMB8P28062 276 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 ASPHD1Q5U4P2 390 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 NR2C2APQ86WQ0 139 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 COMMD1Q8N668 190 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 OR8H1Q8NGG4 311 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 MAFIPQ8WZ33 124 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 FAM3DQ96BQ1 224 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 AGMATQ9BSE5 352 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 C11orf54Q9H0W9 315 aaPredicted RBP12.77□□□□□ -0.37
COLCA2-207ENST00000639470 ALX4Q9H161 411 aaPredicted RBP12.77□□□□□ -0.37
COLCA2-207ENST00000639470 Q9N2K0 584 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 ISYNA1Q9NPH2 558 aa12.77□□□□□ -0.37
COLCA2-207ENST00000639470 H0YJW9 148 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 SOX15O60248 233 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 IGF1P05019 195 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 PPIFP30405 207 aaKnown RBP12.76□□□□□ -0.37
COLCA2-207ENST00000639470 CEACAM6P40199 344 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 C5orf64Q2M2E5 130 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 RNF152Q8N8N0 203 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 CLCC1Q96S66 551 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 OR51J1Q9H342 316 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 TPSG1Q9NRR2 321 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 ELF5Q9UKW6 265 aaPredicted RBP12.76□□□□□ -0.37
COLCA2-207ENST00000639470 A3GALT2U3KPV4 340 aa12.76□□□□□ -0.37
COLCA2-207ENST00000639470 TRBV6-6A0A0A6YYG2 114 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 RRP9O43818 475 aaKnown RBP12.75□□□□□ -0.37
COLCA2-207ENST00000639470 RGS11O94810 467 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 ELANEP08246 267 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 CDX1P47902 265 aaPredicted RBP12.75□□□□□ -0.37
COLCA2-207ENST00000639470 GNB1P62873 340 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 TBCEQ15813 527 aaPredicted RBP12.75□□□□□ -0.37
COLCA2-207ENST00000639470 ECSCRQ19T08 205 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 C5orf30Q96GV9 206 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 FAM103A1Q9BTL3 118 aaKnown RBP12.75□□□□□ -0.37
COLCA2-207ENST00000639470 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
COLCA2-207ENST00000639470 ACOT13Q9NPJ3 140 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 STEAP1Q9UHE8 339 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 V9GY05 133 aa12.75□□□□□ -0.37
COLCA2-207ENST00000639470 ARL6IP5O75915 188 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 NDUFA3O95167 84 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 HLA-DRB1P01911 266 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 EGR2P11161 476 aaPredicted RBP12.74□□□□□ -0.37
COLCA2-207ENST00000639470 KIR2DS1Q14954 304 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 LY6G6FQ5SQ64 297 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 ZNF383Q8NA42 475 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 NPBQ8NG41 125 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 MYOZ3Q8TDC0 251 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 PRR25Q96S07 402 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 CMSS1Q9BQ75 279 aaKnown RBP12.74□□□□□ -0.37
COLCA2-207ENST00000639470 C12orf4Q9NQ89 552 aa12.74□□□□□ -0.37
COLCA2-207ENST00000639470 ZNF230Q9UIE0 474 aaPredicted RBP12.74□□□□□ -0.37
COLCA2-207ENST00000639470 A0A075B6Q4 140 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 TRAV41A0A0B4J266 112 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 RRHO14718 337 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 RAB29O14966 203 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 HSPA12AO43301 675 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 DENRO43583 198 aaKnown RBP12.73□□□□□ -0.37
COLCA2-207ENST00000639470 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
COLCA2-207ENST00000639470 IGKV1-16P04430 117 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 GNB3P16520 340 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 CX3CL1P78423 397 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 C19orf54Q5BKX5 351 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 C22orf42Q6IC83 251 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 LIN54Q6MZP7 749 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 MOB1BQ7L9L4 216 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 ZNF367Q7RTV3 350 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 C4orf3Q8WVX3 66 aa12.73□□□□□ -0.37
COLCA2-207ENST00000639470 HSF4Q9ULV5 492 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms