RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 DVL1O14640 695 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 LGALS4P56470 323 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 VMA21Q3ZAQ7 101 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 SSMEM1Q8WWF3 244 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 SNX22Q96L94 193 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 GINS3Q9BRX5 216 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 GAL3ST2Q9H3Q3 398 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 WIPI2Q9Y4P8 454 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 BIVMQ86UB2 503 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 ZIC4Q8N9L1 334 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 LOXL4Q96JB6 756 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 OR4C12Q96R67 309 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
CNOT3-210ENST00000618939 NKX2-8O15522 239 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 CNN1P51911 297 aaKnown RBP11.89□□□□□ -0.51
CNOT3-210ENST00000618939 NSUN5P2Q63ZY6 315 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 RNF144BQ7Z419 303 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 LHFPL1Q86WI0 220 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 CCL17Q92583 94 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 IGHV3OR15-7A0A075B7D8 119 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 TRGV8A0A0C4DH27 118 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 ZNF716A6NP11 495 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 UCP1P25874 307 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 ATP1A1-AS1Q5TC04 95 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 MYPOPQ86VE0 399 aaPredicted RBP11.89□□□□□ -0.51
CNOT3-210ENST00000618939 ZNF524Q96C55 264 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 TIMD4Q96H15 378 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 ZNF586Q9NXT0 402 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 FKBP11Q9NYL4 201 aa11.89□□□□□ -0.51
CNOT3-210ENST00000618939 RAB4AP20338 218 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 NTF3P20783 257 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 OR5B3Q8NH48 314 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 TAF15Q92804 592 aaKnown RBP eCLIP11.88□□□□□ -0.51
CNOT3-210ENST00000618939 TREM2Q9NZC2 230 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 RNF7Q9UBF6 113 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 MIOXQ9UGB7 285 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 THADAQ6YHU6 1953 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 FGF16O43320 207 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 ZFP36L1Q07352 338 aaKnown RBP11.88□□□□□ -0.51
CNOT3-210ENST00000618939 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 ZNF645Q8N7E2 425 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 SIGLECL1Q8N7X8 197 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 NABP1Q96AH0 204 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 FOXD3Q9UJU5 478 aaPredicted RBP11.88□□□□□ -0.51
CNOT3-210ENST00000618939 RIF1Q5UIP0 2472 aaKnown RBP11.88□□□□□ -0.51
CNOT3-210ENST00000618939 C20orf202A1L168 122 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 K7EQM0 130 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 CRYGSP22914 178 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 LINC00518Q8N0U6 118 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 OR8G5Q8NG78 346 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 HIST1H2BAQ96A08 127 aa11.88□□□□□ -0.51
CNOT3-210ENST00000618939 LNP1A1A4G5 178 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 MGST3O14880 152 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 TMPRSS2O15393 492 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 SRSF10O75494 262 aaKnown RBP11.87□□□□□ -0.51
CNOT3-210ENST00000618939 KLF14Q8TD94 323 aaPredicted RBP11.87□□□□□ -0.51
CNOT3-210ENST00000618939 LSM10Q969L4 123 aaKnown RBP11.87□□□□□ -0.51
CNOT3-210ENST00000618939 ANAPC16Q96DE5 110 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 TPPP3Q9BW30 176 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 C5orf63A6NC05 138 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 FAM90A26D6RGX4 464 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 CFPP27918 469 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 OPRK1P41145 380 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 SUPT4H1P63272 117 aaKnown RBP11.87□□□□□ -0.51
CNOT3-210ENST00000618939 QRFPP83859 136 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 RBKSQ9H477 322 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 PNRC2Q9NPJ4 139 aaKnown RBP11.87□□□□□ -0.51
CNOT3-210ENST00000618939 WISP1O95388 367 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 S100A7P31151 101 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 P2RY6Q15077 328 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 RTN4RL2Q86UN3 420 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 TCTEX1D1Q8N7M0 179 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 REG4Q9BYZ8 158 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 DEPPQ9NTK1 212 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 PRR33A8MZF0 331 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 NPY1RP25929 384 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 GNG4P50150 75 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 B2MP61769 119 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
CNOT3-210ENST00000618939 TIPARPQ7Z3E1 657 aaKnown RBP11.87□□□□□ -0.51
CNOT3-210ENST00000618939 DRAM1Q8N682 238 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 TXN2Q99757 166 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 IL36RNQ9UBH0 155 aa11.87□□□□□ -0.51
CNOT3-210ENST00000618939 MRPS18CQ9Y3D5 142 aaKnown RBP11.87□□□□□ -0.51
CNOT3-210ENST00000618939 HOXB1P14653 301 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-210ENST00000618939 FAM103A1Q9BTL3 118 aaKnown RBP11.86□□□□□ -0.51
CNOT3-210ENST00000618939 ZNF355PQ9NSJ1 428 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 J3QW42 95 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 RHBDL1O75783 438 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 YIF1AO95070 293 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 HPRT1P00492 218 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 CD1BP29016 333 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 HABP2Q14520 560 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-210ENST00000618939 CLDN14O95500 239 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 CYB5R3P00387 301 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-210ENST00000618939 SP9P0CG40 484 aa11.86□□□□□ -0.51
CNOT3-210ENST00000618939 TNFRSF9Q07011 255 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms