RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SLC35E4Q6ICL7 350 aa14.63□□□□□ -0.07
CNOT3-209ENST00000617930 MOGAT3Q86VF5 341 aa14.63□□□□□ -0.07
CNOT3-209ENST00000617930 SMCO4Q9NRQ5 59 aa14.63□□□□□ -0.07
CNOT3-209ENST00000617930 IGHV3OR15-7A0A075B7D8 119 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 A0A0G2JRQ6 117 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 TMEM30CPA0ZSE6 113 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 LHBP01229 141 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 DANCRP0C864 163 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 SPP1P10451 314 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 F2RP25116 425 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 PRDX2P32119 198 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 HOXA1P49639 335 aaPredicted RBP14.62□□□□□ -0.07
CNOT3-209ENST00000617930 SRPXP78539 464 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 NMSQ5H8A3 153 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 FIP1L1Q6UN15 594 aaKnown RBP14.62□□□□□ -0.07
CNOT3-209ENST00000617930 TGIF2LYQ8IUE0 185 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 OR52L2PQ8NGH6 319 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 ITLN1Q8WWA0 313 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 C5orf30Q96GV9 206 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 C11orf1Q9H5F2 150 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 C19orf12Q9NSK7 152 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 ELOVL5Q9NYP7 299 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 CACFD1Q9UGQ2 172 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 CACNA1BQ00975 2339 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 ZFYVE26Q68DK2 2539 aa14.62□□□□□ -0.07
CNOT3-209ENST00000617930 IFNL4K9M1U5 179 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 IGKV1-39P01597 117 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 IGKV1D-39P04432 117 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 SFTPCP11686 197 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 CFHR2P36980 270 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 UQCRFS1P47985 274 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 GUK1Q16774 197 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 SMIM21Q3B7S5 101 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 HSD17B11Q8NBQ5 300 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 OR13A1Q8NGR1 328 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 OR51H1Q8NH63 302 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 MRGPRDQ8TDS7 321 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 C2CD4CQ8TF44 421 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 EIF5A2Q9GZV4 153 aaKnown RBP14.61□□□□□ -0.07
CNOT3-209ENST00000617930 STRAPQ9Y3F4 350 aaKnown RBP14.61□□□□□ -0.07
CNOT3-209ENST00000617930 KIAA2026Q5HYC2 2103 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 H0Y980 276 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 ZNF695Q8IW36 515 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 CMTM1Q8IZ96 169 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 ZFP82Q8N141 532 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 ESRP2Q9H6T0 727 aaKnown RBP14.61□□□□□ -0.07
CNOT3-209ENST00000617930 RPS10P5Q9NQ39 176 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 PPP1R3CQ9UQK1 317 aa14.61□□□□□ -0.07
CNOT3-209ENST00000617930 ICE1Q9Y2F5 2266 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 FAM90A27PA6NNH2 459 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 ADAM20O43506 726 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 IGHV1-46P01743 117 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 HBZP02008 142 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 SSTR5P35346 364 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 GABRA2P47869 451 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 RAB5CP51148 216 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 NHLH2Q02577 135 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 CXorf66Q5JRM2 361 aaPredicted RBP14.6□□□□□ -0.07
CNOT3-209ENST00000617930 WFDC8Q8IUA0 241 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 C15orf54Q8N8G6 183 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 WFIKKN1Q96NZ8 548 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 SH3BGRL3Q9H299 93 aa14.6□□□□□ -0.07
CNOT3-209ENST00000617930 HSPA12AO43301 675 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 EWSR1Q01844 656 aaKnown RBP eCLIP14.59□□□□□ -0.07
CNOT3-209ENST00000617930 IZUMO4Q1ZYL8 232 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 KRBOX4Q5JUW0 171 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 OR5D13Q8NGL4 314 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 C14orf79Q96F83 325 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 ROS1P08922 2347 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 RAB5BP61020 215 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 ZNF585BQ52M93 769 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 ETV3LQ6ZN32 361 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 TMEM182Q6ZP80 229 aaPredicted RBP14.59□□□□□ -0.07
CNOT3-209ENST00000617930 SPIN2AQ99865 258 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 SPIN2BQ9BPZ2 258 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 DCAF16Q9NXF7 216 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 RNF150Q9ULK6 438 aa14.59□□□□□ -0.07
CNOT3-209ENST00000617930 CLEC18AA5D8T8 446 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 COLCA2A8K830 154 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 C15orf65H3BRN8 121 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 M0R036 132 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 AKR1C3P42330 323 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 FHITP49789 147 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 POLR2GP62487 172 aaKnown RBP eCLIP14.58□□□□□ -0.08
CNOT3-209ENST00000617930 BSPH1Q075Z2 132 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 AWAT1Q58HT5 328 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 DUX4L9Q6RFH8 374 aaPredicted RBP14.58□□□□□ -0.08
CNOT3-209ENST00000617930 Q6ZRM9 215 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 DRAM1Q8N682 238 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 CLEC18CQ8NCF0 446 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 ZNRF1Q8ND25 227 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 NUP37Q8NFH4 326 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 RFESDQ8TAC1 157 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 PBDC1Q9BVG4 233 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 GCM1Q9NP62 436 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 OOEPA6NGQ2 149 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 ZNF98A6NK75 572 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 C1QL1O75973 258 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 TMEM50AO95807 157 aa14.58□□□□□ -0.08
CNOT3-209ENST00000617930 SNRNP70P08621 437 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms