RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 NPBWR2P48146 333 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 C10orf128Q5T292 105 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 SPEM1Q8N4L4 309 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 C18orf12Q96KH6 178 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 ZNF576Q9H609 170 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 IGKV1D-8A0A087WSZ0 117 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 HELTA6NFD8 242 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 FAM90A26D6RGX4 464 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 LYL1P12980 280 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 NDUFB7P17568 137 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 USF1P22415 310 aaPredicted RBP12.6□□□□□ -0.39
VPS36-207ENST00000611132 PCP4P48539 62 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 CAMPP49913 170 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 HERPUD1Q15011 391 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 JOSD1Q15040 202 aaPredicted RBP12.6□□□□□ -0.39
VPS36-207ENST00000611132 GFI1BQ5VTD9 330 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 FGFRL1Q8N441 504 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 C9JQL5 133 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 GPX4P36969 197 aaPredicted RBP12.6□□□□□ -0.39
VPS36-207ENST00000611132 PSG5Q15238 335 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
VPS36-207ENST00000611132 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
VPS36-207ENST00000611132 HIST1H2BLQ99880 126 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 CFHR5Q9BXR6 569 aa12.6□□□□□ -0.39
VPS36-207ENST00000611132 MPDZO75970 2070 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 OOEPA6NGQ2 149 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 KCNMB1Q16558 191 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 RSPO4Q2I0M5 234 aaPredicted RBP12.59□□□□□ -0.39
VPS36-207ENST00000611132 HLA-BQ31612 363 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 TRAT1Q6PIZ9 186 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 OR10S1Q8NGN2 331 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 HSD17B10Q99714 261 aaKnown RBP12.59□□□□□ -0.39
VPS36-207ENST00000611132 MRPL13Q9BYD1 178 aaKnown RBP12.59□□□□□ -0.39
VPS36-207ENST00000611132 PLAURQ03405 335 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 CSRP2Q16527 193 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 DEFB108BQ8NET1 73 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 TMEM204Q9BSN7 226 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 ZNF319Q9P2F9 582 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 SHISA7A6NL88 538 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 C10orf91Q5T1B1 145 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 IER2Q9BTL4 223 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 TECRQ9NZ01 308 aaKnown RBP12.59□□□□□ -0.39
VPS36-207ENST00000611132 KLF2Q9Y5W3 355 aaPredicted RBP12.59□□□□□ -0.39
VPS36-207ENST00000611132 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
VPS36-207ENST00000611132 RALGAPA1Q6GYQ0 2036 aa12.59□□□□□ -0.39
VPS36-207ENST00000611132 CD99P14209 185 aa12.58□□□□□ -0.39
VPS36-207ENST00000611132 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.39
VPS36-207ENST00000611132 VENTXO95231 258 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 MT-ND6P03923 174 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 CD82P27701 267 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 LCN2P80188 198 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 HAND1O96004 215 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 CCL1P22362 96 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 LRTM2Q8N967 370 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 A0A1B0GW64 132 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 SOD3P08294 240 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 ZNF835Q9Y2P0 537 aa12.58□□□□□ -0.4
VPS36-207ENST00000611132 TNFRSF9Q07011 255 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 TUSC5Q8IXB3 177 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 MRPL18Q9H0U6 180 aaKnown RBP12.57□□□□□ -0.4
VPS36-207ENST00000611132 SVILO95425 2214 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 FGF5P12034 268 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 HIST3H3Q16695 136 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
VPS36-207ENST00000611132 OR2Y1Q8NGV0 311 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 TMEM56Q96MV1 263 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 UQCR10Q9UDW1 63 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 TMEM56-RWDD3S4R434 201 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 PLXND1Q9Y4D7 1925 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 GRIFINA4D1Z8 144 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 NKX6-3A6NJ46 265 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 CT45A10P0DMU9 189 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 QRFPP83859 136 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 RTP5Q14D33 572 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 ZNF738Q8NE65 137 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 CHRNA10Q9GZZ6 450 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 SYNGR1O43759 233 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 MPDU1O75352 247 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 ERVFRD-1P60508 538 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 LRRC75BQ2VPJ9 315 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 SLC23A3Q6PIS1 610 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 WIPI2Q9Y4P8 454 aa12.57□□□□□ -0.4
VPS36-207ENST00000611132 SPATA45Q537H7 98 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 H1FXQ92522 213 aaKnown RBP12.56□□□□□ -0.4
VPS36-207ENST00000611132 KLHDC3Q9BQ90 382 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 UBE2L3P68036 154 aaKnown RBP12.56□□□□□ -0.4
VPS36-207ENST00000611132 SAXO1Q8IYX7 474 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 OR4S2Q8NH73 311 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 TINAGQ9UJW2 476 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 HEATR5AQ86XA9 2040 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 TRBV24-1A0A075B6N3 115 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 RTN4RL2Q86UN3 420 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 OR4D5Q8NGN0 318 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 TMEM191AQ9H0A3 160 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 DLL3Q9NYJ7 618 aa12.56□□□□□ -0.4
VPS36-207ENST00000611132 LNP1A1A4G5 178 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 TEPPQ6URK8 271 aa12.55□□□□□ -0.4
VPS36-207ENST00000611132 WDFY1Q8IWB7 410 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms