RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LGALS1P09382 135 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 SAA2P0DJI9 122 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 CELP19835 753 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 RANBP1P43487 201 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 CX3CL1P78423 397 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 C19orf54Q5BKX5 351 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 GLT8D1Q68CQ7 371 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 ACSM6Q6P461 480 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 MOB1BQ7L9L4 216 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 KCNG3Q8TAE7 436 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 DLX4Q92988 240 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 RITA1Q96K30 269 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 RCHY1Q96PM5 261 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 OR4C12Q96R67 309 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 ELOVL1Q9BW60 279 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 SLC23A1Q9UHI7 598 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 BIRC6Q9NR09 4857 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 A0A1W2PN81 502 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 MYL12BO14950 172 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 BPNT1O95861 308 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 GP9P14770 177 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 CHRNA7P36544 502 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 WNT4P56705 351 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 GNMTQ14749 295 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 PLGLAQ15195 96 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 CASC10Q5T4H9 136 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 ZNF562Q6V9R5 426 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 SBSPONQ8IVN8 264 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 DHRSXQ8N5I4 330 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 ZFP41Q8N8Y5 198 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 EDARADDQ8WWZ3 215 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 PHYHIPQ92561 330 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 OR5B12Q96R08 314 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 TPSG1Q9NRR2 321 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 PLCXD1Q9NUJ7 323 aa13.78□□□□□ -0.2
SHKBP1-227ENST00000602011 CNTFRP26992 372 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 OR3A3P47888 321 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 RPS27AP62979 156 aaKnown RBP13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 PITPNAQ00169 270 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 C1orf100Q5SVJ3 147 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 OR5AN1Q8NGI8 311 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 CYGBQ8WWM9 190 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 TM2D1Q9BX74 207 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 IFI27L2Q9H2X8 130 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 WASHC3Q9Y3C0 194 aa13.77□□□□□ -0.21
SHKBP1-227ENST00000602011 DNAH1Q9P2D7 4330 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 TRBV6-6A0A0A6YYG2 114 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 ANKRD65E5RJM6 399 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 NAPSAO96009 420 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 TFAP2AP05549 437 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 CT45A6P0DMU7 189 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 CT45A5P0DMU8 189 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 CT45A7P0DMV0 189 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 LYL1P12980 280 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 SPNP16150 400 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 ECSCRQ19T08 205 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 MOGAT2Q3SYC2 334 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 ACTBL2Q562R1 376 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 ZNF880Q6PDB4 577 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 PPP1R27Q86WC6 154 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 IL1F10Q8WWZ1 152 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 FAM46BQ96A09 425 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 TSNAXQ99598 290 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 SULT4A1Q9BR01 284 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 FAAP24Q9BTP7 215 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 TMEM59Q9BXS4 323 aa13.76□□□□□ -0.21
SHKBP1-227ENST00000602011 A8MZ25 164 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 H3BUA1 57 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 H7C2Y5 167 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 SLC22A1O15245 554 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 SPDEFO95238 335 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 FRMD6-AS1P0C7T7 363 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 ZBTB25P24278 435 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 ACSM3Q53FZ2 586 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 RNLSQ5VYX0 342 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 FAM131AQ6UXB0 335 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 NANOGP1Q8N7R0 232 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 RHOVQ96L33 236 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 TMEM68Q96MH6 324 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 FBXL15Q9H469 300 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 CHMP1AQ9HD42 196 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 PLEKHJ1Q9NW61 149 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 PSORS1C1Q9UIG5 152 aa13.75□□□□□ -0.21
SHKBP1-227ENST00000602011 A0A0G2JLM5 398 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 H0YJW9 148 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 LDLRAD4O15165 306 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 SOX15O60248 233 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 CD37P11049 281 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 ZP3P21754 424 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 SLURP1P55000 103 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 UNQ5815/PRO19632Q6UWF5 114 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 C8orf59Q8N0T1 100 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 SVOPQ8N4V2 548 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 ABHD5Q8WTS1 349 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 PTX4Q96A99 478 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 CITED4Q96RK1 184 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 AGMATQ9BSE5 352 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 URM1Q9BTM9 101 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 RANGRFQ9HD47 186 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms