RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CCDC90BQ9GZT6 254 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 RIMS4Q9H426 269 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-210ENST00000590541 ACOT13Q9NPJ3 140 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 TMEM14DPA8MWL7 114 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 LANCL1O43813 399 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 YPEL1O60688 119 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 MOSP00540 346 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 REG1BP48304 166 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 GNB1P62873 340 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 RUNX1Q01196 453 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 ZNF616Q08AN1 781 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 MORN2Q502X0 79 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 CT45A1Q5HYN5 189 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 IZUMO2Q6UXV1 221 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 CT45A3Q8NHU0 189 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 UBALD1Q8TB05 177 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 TMEM203Q969S6 136 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 UBE2E2Q96LR5 201 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 YPEL2Q96QA6 119 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 S1PR3Q99500 378 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 MGLLQ99685 303 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 KLK15Q9H2R5 256 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 ABRACLQ9P1F3 81 aa13.42□□□□□ -0.26
RETREG3-210ENST00000590541 ERICH4A6NGS2 130 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 SLC17A2O00624 439 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 OVOL1O14753 267 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 LDLRAD4O15165 306 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 SAP30O75446 220 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 IGF1P05019 195 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 ZNF134P52741 427 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 QRFPP83859 136 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 TBCEQ15813 527 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-210ENST00000590541 TMEM91Q6ZNR0 172 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 MOB1BQ7L9L4 216 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 ZNF491Q8N8L2 437 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 RBMXL1Q96E39 390 aaKnown RBP13.41□□□□□ -0.26
RETREG3-210ENST00000590541 RASL11BQ9BPW5 248 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 SULT4A1Q9BR01 284 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 PLGRKTQ9HBL7 147 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 PLEKHJ1Q9NW61 149 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 RAB26Q9ULW5 256 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 MGAT4AQ9UM21 535 aa13.41□□□□□ -0.26
RETREG3-210ENST00000590541 ARSBP15848 533 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 BLVRBP30043 206 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-210ENST00000590541 UNC119Q13432 240 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 HMGN3Q15651 99 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 OR10K2Q6IF99 312 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 FAM71E2Q8N5Q1 922 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 OR10V1Q8NGI7 309 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 OR5B12Q96R08 314 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 FAAP24Q9BTP7 215 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 ABHD14AQ9BUJ0 271 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 GHITMQ9H3K2 345 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 ZNF580Q9UK33 172 aa13.4□□□□□ -0.26
RETREG3-210ENST00000590541 SLC31A2O15432 143 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 MRPS14O60783 128 aaKnown RBP13.39□□□□□ -0.27
RETREG3-210ENST00000590541 NAPSAO96009 420 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 PPIFP30405 207 aaKnown RBP13.39□□□□□ -0.27
RETREG3-210ENST00000590541 RPS25P62851 125 aaKnown RBP13.39□□□□□ -0.27
RETREG3-210ENST00000590541 SRSF7Q16629 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
RETREG3-210ENST00000590541 ZNF367Q7RTV3 350 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 C6orf201Q7Z4U5 140 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 FAM89BQ8N5H3 189 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 DLX4Q92988 240 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-210ENST00000590541 CNBD2Q96M20 576 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 STEAP1Q9UHE8 339 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 HSF4Q9ULV5 492 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 VSIG4Q9Y279 399 aa13.39□□□□□ -0.27
RETREG3-210ENST00000590541 TRBV6-6A0A0A6YYG2 114 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 ZNF736B4DX44 427 aaPredicted RBP13.38□□□□□ -0.27
RETREG3-210ENST00000590541 JTBO76095 146 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 IGHV4-30-4P0DP06 118 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 SOX6P35712 828 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 F2RL1P55085 397 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 RAB11BQ15907 218 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 FAM71F2Q6NXP2 309 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 ZNF880Q6PDB4 577 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 Q8N1Y9 231 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 OR2AK2Q8NG84 335 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 OR52L2PQ8NGH6 319 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 NICN1Q9BSH3 213 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 LPAR5Q9H1C0 372 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 C19orf73Q9NVV2 129 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 V9GY05 133 aa13.38□□□□□ -0.27
RETREG3-210ENST00000590541 OR5H8P0DN80 308 aa13.37□□□□□ -0.27
RETREG3-210ENST00000590541 GALP22466 123 aa13.37□□□□□ -0.27
RETREG3-210ENST00000590541 CALRP27797 417 aaKnown RBP13.37□□□□□ -0.27
RETREG3-210ENST00000590541 PPP1CCP36873 323 aaKnown RBP13.37□□□□□ -0.27
RETREG3-210ENST00000590541 FABP5Q01469 135 aa13.37□□□□□ -0.27
RETREG3-210ENST00000590541 LSAMPQ13449 338 aa13.37□□□□□ -0.27
RETREG3-210ENST00000590541 SVOPQ8N4V2 548 aa13.37□□□□□ -0.27
RETREG3-210ENST00000590541 OR6Q1Q8NGQ2 317 aa13.37□□□□□ -0.27
RETREG3-210ENST00000590541 CHCHD6Q9BRQ6 235 aa13.37□□□□□ -0.27
RETREG3-210ENST00000590541 ALX4Q9H161 411 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-210ENST00000590541 CHMP1AQ9HD42 196 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-210ENST00000590541 PIPOXQ9P0Z9 390 aa13.37□□□□□ -0.27
RETREG3-210ENST00000590541 AK6Q9Y3D8 172 aaKnown RBP13.37□□□□□ -0.27
RETREG3-210ENST00000590541 A8MZ25 164 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 ITGB1BP1O14713 200 aa13.36□□□□□ -0.27
RETREG3-210ENST00000590541 PDCD5O14737 125 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms