RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 GAMTQ14353 236 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 LRRC75BQ2VPJ9 315 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 PLPPR2Q96GM1 343 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 MAP1LC3BQ9GZQ8 125 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 PRDM13Q9H4Q3 707 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 CISD1Q9NZ45 108 aaKnown RBP12.86□□□□□ -0.35
SAFB-205ENST00000588852 ZNF729A6NN14 1252 aaPredicted RBP12.86□□□□□ -0.35
SAFB-205ENST00000588852 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.86□□□□□ -0.35
SAFB-205ENST00000588852 ATP1A1-AS1Q5TC04 95 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 OR1L1Q8NH94 360 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 ZDHHC16Q969W1 377 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 C5orf30Q96GV9 206 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 CABLES2Q9BTV7 478 aa12.86□□□□□ -0.35
SAFB-205ENST00000588852 WDR61Q9GZS3 305 aaKnown RBP12.86□□□□□ -0.35
SAFB-205ENST00000588852 SEC14L6B5MCN3 397 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 ZNF737O75373 536 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 RNF224P0DH78 156 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 CD81P60033 236 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 PRSS8Q16651 343 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 ACSM6Q6P461 480 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 MCEMP1Q8IX19 187 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 OR5T1Q8NG75 326 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 SNIP1Q8TAD8 396 aaKnown RBP12.85□□□□□ -0.35
SAFB-205ENST00000588852 LHX4Q969G2 390 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 ELOVL1Q9BW60 279 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 AURKAIP1Q9NWT8 199 aaPredicted RBP12.85□□□□□ -0.35
SAFB-205ENST00000588852 MRPS18CQ9Y3D5 142 aaKnown RBP12.85□□□□□ -0.35
SAFB-205ENST00000588852 TRAV1-1A0A0B4J248 108 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 CLDN34H7C241 214 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 WISP2O76076 250 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 CER1O95813 267 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 IGHEP01854 428 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 ARR3P36575 388 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 OR52L2PQ8NGH6 319 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 RIMS4Q9H426 269 aaPredicted RBP12.85□□□□□ -0.35
SAFB-205ENST00000588852 SIRT7Q9NRC8 400 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 IL17BQ9UHF5 180 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 DMRT1Q9Y5R6 373 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 ICE1Q9Y2F5 2266 aa12.85□□□□□ -0.35
SAFB-205ENST00000588852 NXPH2O95156 264 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 TDGF1P13385 188 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 PMP22Q01453 160 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 SLC38A11Q08AI6 406 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 ZNF497Q6ZNH5 498 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
SAFB-205ENST00000588852 TMEM9BQ9NQ34 198 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 IDH3GP51553 393 aaPredicted RBP12.84□□□□□ -0.35
SAFB-205ENST00000588852 C1orf87Q8N0U7 546 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 GCNT2Q8N0V5 402 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 MBD3L1Q8WWY6 194 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 SMIM7Q9BQ49 75 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 MPC1Q9Y5U8 109 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 IGHV3-43A0A0B4J1X8 118 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 B4E171 279 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 LAMTOR5O43504 91 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 CYB5R3P00387 301 aaPredicted RBP12.84□□□□□ -0.35
SAFB-205ENST00000588852 IGHV3-43DP0DP04 118 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 EGR1P18146 543 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 GZMHP20718 246 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 TSPAN7P41732 249 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 DEFA6Q01524 100 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 AESQ08117 197 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 DPPA3Q6W0C5 159 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 OR2D2Q9H210 308 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 SLC39A9Q9NUM3 307 aa12.84□□□□□ -0.35
SAFB-205ENST00000588852 TRBV6-6A0A0A6YYG2 114 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 OR5B21A6NL26 309 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 DEFB108AA8MXU0 73 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 PHOX2AO14813 284 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 COX5BP10606 129 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 OR3A1P47881 315 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 BRWD1-AS2P59051 145 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 TFF3Q07654 80 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 RFESDQ8TAC1 157 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 LSM10Q969L4 123 aaKnown RBP12.83□□□□□ -0.36
SAFB-205ENST00000588852 POM121Q96HA1 1249 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 B4GALT7Q9UBV7 327 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 VAX2Q9UIW0 290 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 FZR1Q9UM11 496 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 GAB2Q9UQC2 676 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 OR5H1A6NKK0 313 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 J3QT63 122 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 ZG16O60844 167 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 TMEM41BQ5BJD5 291 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 RNFT1Q5M7Z0 435 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 DCAF10Q5QP82 559 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 Q6ZR03 302 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 C16orf82Q7Z2V1 217 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 GTF3AQ92664 365 aaKnown RBP12.83□□□□□ -0.36
SAFB-205ENST00000588852 S100PBPQ96BU1 408 aa12.83□□□□□ -0.36
SAFB-205ENST00000588852 LYZL6O75951 148 aa12.82□□□□□ -0.36
SAFB-205ENST00000588852 MEOX1P50221 254 aa12.82□□□□□ -0.36
SAFB-205ENST00000588852 HBG1P69891 147 aa12.82□□□□□ -0.36
SAFB-205ENST00000588852 HBG2P69892 147 aa12.82□□□□□ -0.36
SAFB-205ENST00000588852 LTC4SQ16873 150 aa12.82□□□□□ -0.36
SAFB-205ENST00000588852 TMPRSS7Q7RTY8 843 aa12.82□□□□□ -0.36
SAFB-205ENST00000588852 OR4X1Q8NH49 305 aa12.82□□□□□ -0.36
SAFB-205ENST00000588852 GP6Q9HCN6 339 aa12.82□□□□□ -0.36
SAFB-205ENST00000588852 TREM2Q9NZC2 230 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms