RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 Q9N2K0 584 aa13.6□□□□□ -0.23
RPA1-203ENST00000571058 NECAP2Q9NVZ3 263 aa13.6□□□□□ -0.23
RPA1-203ENST00000571058 TMEM272A0A1B0GTI8 110 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 OR5H14A6NHG9 310 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 IGF1P05019 195 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 ELANEP08246 267 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 RAB3BP20337 219 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 RAB6AP20340 208 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 VDAC1P21796 283 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 MC5RP33032 325 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 OR3A3P47888 321 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 SERPINB10P48595 397 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 ACTBP60709 375 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 FOXE3Q13461 319 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 CXorf66Q5JRM2 361 aaPredicted RBP13.59□□□□□ -0.23
RPA1-203ENST00000571058 HES5Q5TA89 166 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 C5orf24Q7Z6I8 188 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 PTX4Q96A99 478 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 RAB3CQ96E17 227 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 CENPOQ9BU64 300 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 ZNF107Q9UII5 783 aaPredicted RBP13.59□□□□□ -0.23
RPA1-203ENST00000571058 LINC00527Q9UJ94 153 aa13.59□□□□□ -0.23
RPA1-203ENST00000571058 METTL21EPA6NDL7 271 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 LINC01548A6NM66 108 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 NUDT19A8MXV4 375 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 NBR2O15453 112 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 ST8SIA5O15466 376 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 DIRAS3O95661 229 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 HLA-DRB1P01911 266 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 CD3GP09693 182 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 FGF9P31371 208 aaPredicted RBP13.58□□□□□ -0.24
RPA1-203ENST00000571058 CEACAM6P40199 344 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 ARL6IP1Q15041 203 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 PLAC9Q5JTB6 97 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 ZNF695Q8IW36 515 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 SPARTQ8N0X7 666 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 NPBQ8NG41 125 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 AGMATQ9BSE5 352 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 HDHD3Q9BSH5 251 aaPredicted RBP13.58□□□□□ -0.24
RPA1-203ENST00000571058 KIAA1456Q9P272 454 aa13.58□□□□□ -0.24
RPA1-203ENST00000571058 TRDCB7Z8K6 153 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 RBBP9O75884 186 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 IGHG4P01861 327 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 IGLL1P15814 213 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 PSMB9P28065 219 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 MYCNOSP40205 109 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 THBS3P49746 956 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 KIR2DS1Q14954 304 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 TPRA1Q86W33 373 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 LINC00482Q8N8I6 264 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 KLHL30-AS1Q8NEE0 82 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 OR4A4PQ8NGN8 299 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 OR10R2Q8NGX6 335 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 RNF5Q99942 180 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 HSPB9Q9BQS6 159 aa13.57□□□□□ -0.24
RPA1-203ENST00000571058 MCRIP2Q9BUT9 160 aaKnown RBP13.57□□□□□ -0.24
RPA1-203ENST00000571058 NDUFA3O95167 84 aa13.56□□□□□ -0.24
RPA1-203ENST00000571058 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
RPA1-203ENST00000571058 OR10A3P58181 314 aa13.56□□□□□ -0.24
RPA1-203ENST00000571058 CFHR3Q02985 330 aa13.56□□□□□ -0.24
RPA1-203ENST00000571058 C5orf64Q2M2E5 130 aa13.56□□□□□ -0.24
RPA1-203ENST00000571058 C22orf42Q6IC83 251 aa13.56□□□□□ -0.24
RPA1-203ENST00000571058 C11orf54Q9H0W9 315 aaPredicted RBP13.56□□□□□ -0.24
RPA1-203ENST00000571058 ZNF221Q9UK13 617 aa13.56□□□□□ -0.24
RPA1-203ENST00000571058 STUB1Q9UNE7 303 aa13.56□□□□□ -0.24
RPA1-203ENST00000571058 PRKDCP78527 4128 aaKnown RBP13.56□□□□□ -0.24
RPA1-203ENST00000571058 SHISA3A0PJX4 238 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 SCTP09683 121 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 CT45A6P0DMU7 189 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 CT45A5P0DMU8 189 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 CT45A7P0DMV0 189 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 SLC2A2P11168 524 aaPredicted RBP13.55□□□□□ -0.24
RPA1-203ENST00000571058 FOXB2Q5VYV0 432 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 LIN54Q6MZP7 749 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 ZNF773Q6PK81 442 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 FAM131AQ6UXB0 335 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 ETV3LQ6ZN32 361 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 MRPL41Q8IXM3 137 aaKnown RBP13.55□□□□□ -0.24
RPA1-203ENST00000571058 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.55□□□□□ -0.24
RPA1-203ENST00000571058 OR5AN1Q8NGI8 311 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 OR8U1Q8NH10 309 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 TOLLIPQ9H0E2 274 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 OR51J1Q9H342 316 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 OR1A1Q9P1Q5 309 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 SSR3Q9UNL2 185 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 KCNK7Q9Y2U2 307 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 WASHC3Q9Y3C0 194 aa13.55□□□□□ -0.24
RPA1-203ENST00000571058 NOTOA8MTQ0 251 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 H0YJW9 148 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 RAB27BO00194 218 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 MFNGO00587 321 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 FABP7O15540 132 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 SCGNO76038 276 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 HIST1H1DP16402 221 aaKnown RBP13.54□□□□□ -0.24
RPA1-203ENST00000571058 SRSF7Q16629 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
RPA1-203ENST00000571058 RPL39P5Q59GN2 51 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 C8orf86Q6ZUL3 223 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 DPF1Q92782 380 aa13.54□□□□□ -0.24
RPA1-203ENST00000571058 ABHD14BQ96IU4 210 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms