RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 IRF2P14316 349 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 CCL1P22362 96 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 UCP1P25874 307 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 SLC35B1P78383 322 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 C10orf128Q5T292 105 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 TPRX1Q8N7U7 411 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 OR5AU1Q8NGC0 362 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 HIST1H2BLQ99880 126 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 HSPB9Q9BQS6 159 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 SMOC1Q9H4F8 434 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 NAGKQ9UJ70 344 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 FZR1Q9UM11 496 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 MPC1Q9Y5U8 109 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 SZT2Q5T011 3432 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 PMS2P1A4D2B8 440 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 SNURFLB1AK76 121 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 ZNF253O75346 499 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 KBTBD11O94819 623 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 WNT5BQ9H1J7 359 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
USB1-212ENST00000566082 EPHA8P29322 1005 aaPredicted RBP9.03□□□□□ -0.96
USB1-212ENST00000566082 CEACAM21Q3KPI0 293 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 ACSM6Q6P461 480 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 C6orf15Q6UXA7 325 aaPredicted RBP9.03□□□□□ -0.96
USB1-212ENST00000566082 OR8G5Q8NG78 346 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 TMEM171Q8WVE6 324 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 EDARADDQ8WWZ3 215 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 ACY3Q96HD9 319 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 LRFN3Q9BTN0 628 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 SDF2L1Q9HCN8 221 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 GOLT1BQ9Y3E0 138 aa9.03□□□□□ -0.96
USB1-212ENST00000566082 TRAV38-1A0A0B4J264 116 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 IGKV1-12A0A0C4DH73 117 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 IGKV1D-12P01611 117 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 SNRPCP09234 159 aaKnown RBP9.02□□□□□ -0.97
USB1-212ENST00000566082 SPEM2Q0P670 501 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 IL11RAQ14626 422 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 Q6ZN92 141 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 Q8IYB0 196 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 OR4D5Q8NGN0 318 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 OR2Y1Q8NGV0 311 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 OR5B3Q8NH48 314 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 KLRC4-KLRK1H3BQV0 150 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 TOX3O15405 576 aaPredicted RBP9.02□□□□□ -0.97
USB1-212ENST00000566082 APOA2P02652 100 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 KCNMB1Q16558 191 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 ALKBH6Q3KRA9 238 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 LBHQ53QV2 105 aaPredicted RBP9.02□□□□□ -0.97
USB1-212ENST00000566082 RBMXL3Q8N7X1 1067 aaKnown RBP9.02□□□□□ -0.97
USB1-212ENST00000566082 C1orf147Q96MC9 270 aaPredicted RBP9.02□□□□□ -0.97
USB1-212ENST00000566082 A0A1W2PR77 199 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 C20orf202A1L168 122 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 E9PLN8 166 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 J3QT63 122 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 IGHV2-70P01814 119 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 GNG4P50150 75 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 KLHDC1Q8N7A1 406 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 ZNF441Q8N8Z8 693 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 DLL3Q9NYJ7 618 aa9.02□□□□□ -0.97
USB1-212ENST00000566082 ST8SIA5O15466 376 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 AESQ08117 197 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 MRPL54Q6P161 138 aaKnown RBP9.01□□□□□ -0.97
USB1-212ENST00000566082 C1QL4Q86Z23 238 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 C22orf15Q8WYQ4 148 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 WDR61Q9GZS3 305 aaKnown RBP9.01□□□□□ -0.97
USB1-212ENST00000566082 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 ARL2-SNX15V9GYD0 113 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 CEACAM18A8MTB9 384 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 PTTG1IPP53801 180 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 CYP2G1PQ6ZSU1 146 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 OR1L6Q8NGR2 347 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 TMEM54Q969K7 222 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 R3HDM4Q96D70 268 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 STARD4Q96DR4 205 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 C14orf144Q96I85 54 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 VPS25Q9BRG1 176 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 PCED1AQ9H1Q7 454 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 BPTFQ12830 3046 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 C5orf42Q9H799 3197 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 hCG_38984A0A1B0GV85 526 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 GDF9O60383 454 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 OR5G3P0C626 314 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 P2RY6Q15077 328 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 ZNF124Q15973 351 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 NFAM1Q8NET5 270 aaPredicted RBP9.01□□□□□ -0.97
USB1-212ENST00000566082 OR4P4Q8NGL7 312 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 TPPP3Q9BW30 176 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 RAB9BQ9NP90 201 aa9.01□□□□□ -0.97
USB1-212ENST00000566082 CHCHD2Q9Y6H1 151 aaPredicted RBP9.01□□□□□ -0.97
USB1-212ENST00000566082 USP34Q70CQ2 3546 aa9□□□□□ -0.97
USB1-212ENST00000566082 IGKV1-27A0A075B6S5 117 aa9□□□□□ -0.97
USB1-212ENST00000566082 SYNGR3O43761 229 aa9□□□□□ -0.97
USB1-212ENST00000566082 PDE6DO43924 150 aa9□□□□□ -0.97
USB1-212ENST00000566082 ZG16O60844 167 aa9□□□□□ -0.97
USB1-212ENST00000566082 LYZL6O75951 148 aa9□□□□□ -0.97
USB1-212ENST00000566082 UBE2G1P62253 170 aa9□□□□□ -0.97
USB1-212ENST00000566082 ID3Q02535 119 aa9□□□□□ -0.97
USB1-212ENST00000566082 WDFY1Q8IWB7 410 aa9□□□□□ -0.97
USB1-212ENST00000566082 CISD2Q8N5K1 135 aaKnown RBP9□□□□□ -0.97
USB1-212ENST00000566082 LRTM2Q8N967 370 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms