RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 FAM212BQ9NTI7 297 aaPredicted RBP11.42□□□□□ -0.58
TPM1-215ENST00000558868 GFOD1Q9NXC2 390 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 IDI2-AS1Q9NZ38 188 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 GSKIPQ9P0R6 139 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DUX4Q9UBX2 424 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 CREBBPQ92793 2442 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 ARFGEF3Q5TH69 2177 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DSCAMO60469 2012 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 RAI1Q7Z5J4 1906 aaPredicted RBP11.41□□□□□ -0.58
TPM1-215ENST00000558868 TRBV23-1A0A0A0MS06 115 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 IGHV3-43A0A0B4J1X8 118 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 C19orf84I3L1E1 186 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 GPR37O15354 613 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 ATG12O94817 140 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 OR2F2O95006 317 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 IGLV2-14P01704 120 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 SOD3P08294 240 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 IGHV3-43DP0DP04 118 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 COL8A2P25067 703 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 LOXL3P58215 753 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 RPL31P62899 125 aaKnown RBP11.41□□□□□ -0.58
TPM1-215ENST00000558868 IFITM2Q01629 132 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 IL15RAQ13261 267 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 OR2F1Q13607 317 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 LTC4SQ16873 150 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 LRRC37A5PQ49AS3 106 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 THOC7Q6I9Y2 204 aaKnown RBP11.41□□□□□ -0.58
TPM1-215ENST00000558868 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 SLC35G3Q8N808 338 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 OR51H1Q8NH63 302 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 HSD17B10Q99714 261 aaKnown RBP11.41□□□□□ -0.58
TPM1-215ENST00000558868 PARP12Q9H0J9 701 aaKnown RBP11.41□□□□□ -0.58
TPM1-215ENST00000558868 UBTD1Q9HAC8 227 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 TNFSF18Q9UNG2 199 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 KIAA2026Q5HYC2 2103 aa11.41□□□□□ -0.58
TPM1-215ENST00000558868 DVL1O14640 695 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 RP2O75695 350 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 IGHV2-70P01814 119 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 LYL1P12980 280 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 CXCL2P19875 107 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 VDAC1P21796 283 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 S100A11P31949 105 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 GPR12P47775 334 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 ZNF345Q14585 488 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 OPCMLQ14982 345 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 Q3ZCU0 254 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 LYPD2Q6UXB3 125 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 ACOT7LQ6ZUV0 252 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 TMUB2Q71RG4 321 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 ZNF767PQ75MW2 155 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.4□□□□□ -0.58
TPM1-215ENST00000558868 LHFPL5Q8TAF8 219 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 H1FXQ92522 213 aaKnown RBP11.4□□□□□ -0.58
TPM1-215ENST00000558868 ABHD14BQ96IU4 210 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 SPOCK3Q9BQ16 436 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 MIOXQ9UGB7 285 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 RNF150Q9ULK6 438 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 PSG11Q9UQ72 335 aa11.4□□□□□ -0.58
TPM1-215ENST00000558868 A0A1W2PPH5 198 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 MPTX1A8MV57 137 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 TSC22D2O75157 780 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 SLC25A6P12236 298 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 DAOP14920 347 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 ZNF16P17020 682 aaPredicted RBP11.39□□□□□ -0.59
TPM1-215ENST00000558868 TMEM33P57088 247 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 S100A10P60903 97 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 NOTCH2Q04721 2471 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 TMEM155Q4W5P6 130 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 CD300LFQ8TDQ1 290 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 DCUN1D4Q92564 292 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 LSM10Q969L4 123 aaKnown RBP11.39□□□□□ -0.59
TPM1-215ENST00000558868 ZNF714Q96N38 554 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 AGMATQ9BSE5 352 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 CHODLQ9H9P2 273 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 MBD2Q9UBB5 411 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 RPUSD1Q9UJJ7 312 aaKnown RBP11.39□□□□□ -0.59
TPM1-215ENST00000558868 LAMP3Q9UQV4 416 aa11.39□□□□□ -0.59
TPM1-215ENST00000558868 ROS1P08922 2347 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 CLEC18AA5D8T8 446 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 ST8SIA5O15466 376 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 CLDN1O95832 211 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 SSTR2P30874 369 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 TLE4Q04727 773 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 EIF4EBP1Q13541 118 aaPredicted RBP11.38□□□□□ -0.59
TPM1-215ENST00000558868 RAB32Q13637 225 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 TMEM200BQ69YZ2 307 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 HEPN1Q6WQI6 88 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 TCF23Q7RTU1 214 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 KCNRGQ8N5I3 272 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 CLEC18CQ8NCF0 446 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 OR8B3Q8NGG8 313 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 RNASE11Q8TAA1 199 aaKnown RBP11.38□□□□□ -0.59
TPM1-215ENST00000558868 TCTEX1D2Q8WW35 142 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 OR8B2Q96RD0 313 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 ABHD14AQ9BUJ0 271 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 RNF126Q9BV68 326 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 ARL6Q9H0F7 186 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 C19orf12Q9NSK7 152 aa11.38□□□□□ -0.59
TPM1-215ENST00000558868 SDHAF2Q9NX18 166 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms