RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 OR10J4P0C629 311 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 CHRNB4P30926 498 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 PJVKQ0ZLH3 352 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 TNXAQ16473 311 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 HSD17B10Q99714 261 aaKnown RBP9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 TLNRD1Q9H1K6 362 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 PNRC2Q9NPJ4 139 aaKnown RBP9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 UQCC1Q9NVA1 299 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 CD55P08174 381 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 F2RP25116 425 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 DTD1Q8TEA8 209 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 MAP1LC3B2A6NCE7 125 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 SNRPEP62304 92 aaKnown RBP9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 LY6G6FQ5SQ64 297 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 NCMAPQ5T1S8 102 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 C1orf185Q5T7R7 199 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 INO80CQ6PI98 192 aaPredicted RBP9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 OR13A1Q8NGR1 328 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 MAP1LC3BQ9GZQ8 125 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 ZNF835Q9Y2P0 537 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 IL18BPO95998 194 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 CD3EP07766 207 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 SCAND1P57086 179 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 RTL8BQ17RB0 113 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 ZNF429Q86V71 674 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 FGFRL1Q8N441 504 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 IGFBPL1Q8WX77 278 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 MALSU1Q96EH3 234 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 NMES1Q9C002 83 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 TMPRSS5Q9H3S3 457 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 ZNF665Q9H7R5 613 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 SLC35D1Q9NTN3 355 aa9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 CISD1Q9NZ45 108 aaKnown RBP9.16□□□□□ -0.94
TGFBR1-209ENST00000552516 TRAV38-1A0A0B4J264 116 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 CCL3L1P16619 93 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 NPBWR1P48145 328 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 ARF6P62330 175 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 FAM209AQ5JX71 171 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 RIPPLY2Q5TAB7 128 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 TMEM252Q8N6L7 170 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 FAM216AQ8WUB2 273 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 FAM103A1Q9BTL3 118 aaKnown RBP9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 DENND4AQ7Z401 1863 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 RGS13O14921 159 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 PTBP3O95758 552 aaKnown RBP9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 TMEM211Q6ICI0 200 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 DCAF16Q9NXF7 216 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 RNF7Q9UBF6 113 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 IGHV3OR16-13A0A075B7E8 117 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 IGHV3-74A0A0B4J1X5 117 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 A0A1W2PNU3 283 aaPredicted RBP9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 AWAT1Q58HT5 328 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 PEAR1Q5VY43 1037 aaPredicted RBP9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 TMEM65Q6PI78 240 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 TMEM230Q96A57 120 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 SNRNP40Q96DI7 357 aaKnown RBP9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 BOD1Q96IK1 185 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 USB1Q9BQ65 265 aaKnown RBP9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 CENPEQ02224 2701 aa9.15□□□□□ -0.94
TGFBR1-209ENST00000552516 OR5P3Q8WZ94 311 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 NEUROG1Q92886 237 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 RPEQ96AT9 228 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 POM121L2Q96KW2 1035 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 UNKLQ9H9P5 680 aaKnown RBP9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 SMCO4Q9NRQ5 59 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 KCNMB2Q9Y691 235 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 C17orf112F2Z3M2 114 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 RAMP3O60896 148 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 MT-CO2P00403 227 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 HKR1P10072 659 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 RPP30P78346 268 aaKnown RBP9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 MRPL41Q8IXM3 137 aaKnown RBP9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 OR5D13Q8NGL4 314 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 OIT3Q8WWZ8 545 aa9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 MSI2Q96DH6 328 aaKnown RBP9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 SLC25A10Q9UBX3 287 aaPredicted RBP9.15□□□□□ -0.95
TGFBR1-209ENST00000552516 H3F3AP84243 136 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 VAX1Q5SQQ9 334 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 SIGIRRQ6IA17 410 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 OR10G4Q8NGN3 311 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 OR10G9Q8NGN4 311 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 OR10G7Q8NGN6 311 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 WFIKKN1Q96NZ8 548 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 TMEM218A2RU14 115 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 PLXNB1O43157 2135 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 GATA2P23769 480 aaPredicted RBP9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 B3GALT5-AS1P59052 145 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 Q6ZT83 130 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 Q8IYB0 196 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 DRAM1Q8N682 238 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 OR8G5Q8NG78 346 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 HARBI1Q96MB7 349 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 CABLES2Q9BTV7 478 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 NIT2Q9NQR4 276 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 LPAR3Q9UBY5 353 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 C12orf77C9JDV5 145 aa9.14□□□□□ -0.95
TGFBR1-209ENST00000552516 TAAR5O14804 337 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms