RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 CBY3A6NI87 242 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 CRISP2P16562 243 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF90Q03938 601 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 GAGE1Q13065 139 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF468Q5VIY5 522 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 RHBDD2Q6NTF9 364 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 HAPLN4Q86UW8 402 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 TMEM54Q969K7 222 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 CIB3Q96Q77 187 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 ATP23Q9Y6H3 246 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 IGHV1OR21-1A0A087WYE8 117 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 TRAV34A0A0B4J273 112 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 IGHV3-9P01782 118 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 ADMP35318 185 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 HLA-BQ31612 363 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 ASCL4Q6XD76 172 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 OR5AU1Q8NGC0 362 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 OR56B2PQ8NGI1 322 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 OR51B6Q9H340 312 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 IL36GQ9NZH8 169 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 C20orf202A1L168 122 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 F6UZH7 168 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 SYNGR3O43761 229 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 TNFSF13O75888 250 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 NDUFB4O95168 129 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 C1QTNF9P0C862 333 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 CRYGSP22914 178 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 CHRNB4P30926 498 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 Q6ZS52 159 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 RASL10BQ96S79 203 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 RNF24Q9Y225 148 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 CACNA1DQ01668 2161 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 NCOR1O75376 2440 aa10.94□□□□□ -0.66
SFSWAP-209ENST00000540469 PTTG1IPP53801 180 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 AAED1Q7RTV5 226 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 NUFIP2Q7Z417 695 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 ERASQ7Z444 233 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 MRPS18CQ9Y3D5 142 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 IGKV1-6A0A0C4DH72 117 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 hCG_38984A0A1B0GV85 526 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 A0A1W2PPV4 95 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 CRYABP02511 175 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 TYMSP04818 313 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 CBLN1P23435 193 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 PTGDSP41222 190 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 PSG4Q00888 419 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 MSMO1Q15800 293 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 C9orf135Q5VTT2 229 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF295-AS1Q8N0V1 137 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 NFAM1Q8NET5 270 aaPredicted RBP10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 FER1L5A0AVI2 2057 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 LRP4O75096 1905 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 VENTXO95231 258 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 FKBP2P26885 142 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 CEACAM16Q2WEN9 425 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 MRPL21Q7Z2W9 205 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 MCEMP1Q8IX19 187 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 OR10P1Q8NGE3 313 aa10.93□□□□□ -0.66
SFSWAP-209ENST00000540469 OR6C6A6NF89 314 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 KRASP01116 189 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 CEACAM8P31997 349 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 CDKN1AP38936 164 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 CDC34P49427 236 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 THBS3P49746 956 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 CARD18P57730 90 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 TMEM204Q9BSN7 226 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 PXMP4Q9Y6I8 212 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 SERF1AO75920 110 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 NAPSAO96009 420 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 PRDX4Q13162 271 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 Q6ZWC4 215 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF501Q96CX3 271 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF488Q96MN9 340 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 FOXB1Q99853 325 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF576Q9H609 170 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 LIN7CQ9NUP9 197 aaKnown RBP10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 OR1A1Q9P1Q5 309 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 CLN8Q9UBY8 286 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 SUMO1P63165 101 aaKnown RBP10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 PAFAH1B2P68402 229 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 SPINK9Q5DT21 86 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 DERL1Q9BUN8 251 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 TMEM147Q9BVK8 224 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF586Q9NXT0 402 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 ZNF391Q9UJN7 358 aa10.92□□□□□ -0.66
SFSWAP-209ENST00000540469 LMO7DNF2Z398 122 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 CBR3O75828 277 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 UMODP07911 640 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 CCL2P13500 99 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 FGF12P61328 243 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 ACSF3Q4G176 576 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 TMEM42Q69YG0 159 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 LINC01551Q86U37 167 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 C20orf144Q9BQM9 153 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 CHRNA10Q9GZZ6 450 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 GPR35Q9HC97 309 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 TMEM38BQ9NVV0 291 aa10.91□□□□□ -0.66
SFSWAP-209ENST00000540469 ZDBF2Q9HCK1 2354 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms