RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CDSNQ15517 529 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 PHLDA2Q53GA4 152 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 SPRNQ5BIV9 151 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 CDPF1Q6NVV7 123 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 SLC22A25Q6T423 547 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 WDR82Q6UXN9 313 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 LIAT1Q6ZQX7 453 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 C5orf24Q7Z6I8 188 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 ZNF383Q8NA42 475 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 C18orf12Q96KH6 178 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 SLC35B3Q9H1N7 401 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 TAAR3PQ9P1P4 343 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 FBXO7Q9Y3I1 522 aa14.37□□□□□ -0.11
PCDHB17P-201ENST00000539533 GPR37O15354 613 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 RNF224P0DH78 156 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 ASCL1P50553 236 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 RPS23P62266 143 aaKnown RBP14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 HSD17B11Q8NBQ5 300 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 OR52M1Q8NGK5 317 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 CD300LFQ8TDQ1 290 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 PBDC1Q9BVG4 233 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 KCNJ16Q9NPI9 418 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 ACACBO00763 2458 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 CHD3Q12873 2000 aaKnown RBP14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 ST8SIA5O15466 376 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 SELLP14151 372 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 GRNP28799 593 aaKnown RBP14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 CHRNB4P30926 498 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 NHLH2Q02577 135 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 KIAA0141Q14154 515 aaPredicted RBP14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 SLC2A9Q9NRM0 540 aa14.36□□□□□ -0.11
PCDHB17P-201ENST00000539533 SIRPB1O00241 398 aa14.35□□□□□ -0.11
PCDHB17P-201ENST00000539533 SPRY3O43610 288 aa14.35□□□□□ -0.11
PCDHB17P-201ENST00000539533 NAPSAO96009 420 aa14.35□□□□□ -0.11
PCDHB17P-201ENST00000539533 HOXA5P20719 270 aa14.35□□□□□ -0.11
PCDHB17P-201ENST00000539533 NUP37Q8NFH4 326 aa14.35□□□□□ -0.11
PCDHB17P-201ENST00000539533 MSI2Q96DH6 328 aaKnown RBP14.35□□□□□ -0.11
PCDHB17P-201ENST00000539533 RHOVQ96L33 236 aa14.35□□□□□ -0.11
PCDHB17P-201ENST00000539533 HES4Q9HCC6 221 aa14.35□□□□□ -0.11
PCDHB17P-201ENST00000539533 ST8SIA3O43173 380 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 OR2H2O95918 312 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 CEBPDP49716 269 aaPredicted RBP14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 ZNF146Q15072 292 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 LGI3Q8N145 548 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 ZNF286AQ9HBT8 521 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 OR14J1Q9UGF5 321 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 ROS1P08922 2347 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 A0A1B0GV90 55 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 IFITM10A6NMD0 228 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 OR13C7P0DN81 318 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 S100A2P29034 98 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 PPP1CCP36873 323 aaKnown RBP14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 C20orf204Q6ZNR8 217 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 TMEM182Q6ZP80 229 aaPredicted RBP14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 C1QL4Q86Z23 238 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 FAM213BQ8TBF2 198 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 OR2V2Q96R30 315 aa14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 RCL1Q9Y2P8 373 aaKnown RBP14.34□□□□□ -0.11
PCDHB17P-201ENST00000539533 A0A1B0GV50 99 aa14.33□□□□□ -0.11
PCDHB17P-201ENST00000539533 K7N7A8 449 aa14.33□□□□□ -0.11
PCDHB17P-201ENST00000539533 CD200P41217 278 aa14.33□□□□□ -0.11
PCDHB17P-201ENST00000539533 NDUFA6P56556 154 aa14.33□□□□□ -0.11
PCDHB17P-201ENST00000539533 SELENOVP59797 346 aa14.33□□□□□ -0.11
PCDHB17P-201ENST00000539533 LFNGQ8NES3 379 aa14.33□□□□□ -0.11
PCDHB17P-201ENST00000539533 ATP23Q9Y6H3 246 aa14.33□□□□□ -0.11
PCDHB17P-201ENST00000539533 DIDO1Q9BTC0 2240 aaKnown RBP14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 SLC33A1O00400 549 aaPredicted RBP14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 RPS10P46783 165 aaKnown RBP14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 CDX1P47902 265 aaPredicted RBP14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 CLINT1Q14677 625 aa14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 SSX8Q7RTT4 187 aa14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 OR11L1Q8NGX0 322 aa14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 LINC01560Q8TB33 94 aa14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 Q9N2K0 584 aa14.33□□□□□ -0.12
PCDHB17P-201ENST00000539533 A0A1B0GW64 132 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 PHF1O43189 567 aaPredicted RBP14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 TFF1P04155 84 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 MZT1Q08AG7 82 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 ACP7Q6ZNF0 438 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 SSX9Q7RTT3 188 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 LRRC29Q8WV35 223 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 C14orf144Q96I85 54 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 SH2D1BO14796 132 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 OR2C1O95371 312 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 EWSR1Q01844 656 aaKnown RBP eCLIP14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 ADIPOQQ15848 244 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 FBXL19-AS1Q494R0 122 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 SPIN3Q5JUX0 258 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 OR4D5Q8NGN0 318 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 MRPL30Q8TCC3 161 aaKnown RBP14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 RNASE6Q93091 150 aaKnown RBP14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 MOB3AQ96BX8 217 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 MEGF10Q96KG7 1140 aa14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 GAR1Q9NY12 217 aaKnown RBP14.32□□□□□ -0.12
PCDHB17P-201ENST00000539533 PTBP3O95758 552 aaKnown RBP14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 HAND1O96004 215 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 SCTP09683 121 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 OR4A8P0C604 315 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 MAS1LP35410 378 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 GNMTQ14749 295 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms