RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	EGR1	P18146	543 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	GPR12	P47775	334 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	CAMLG	P49069	296 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	POLR2G	P62487	172 aa	Known RBP eCLIP	9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	TESK1	Q15569	626 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	LTC4S	Q16873	150 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	NMS	Q5H8A3	153 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	ZNF561	Q8N587	486 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	EIF4E3	Q8N5X7	224 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006		Q8NA96	180 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	UBAC2	Q8NBM4	344 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	OR52L2P	Q8NGH6	319 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	OR1S2	Q8NGQ3	325 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	SNRNP40	Q96DI7	357 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	COQ2	Q96H96	371 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	RAB40C	Q96S21	281 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	CLCC1	Q96S66	551 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	GPHA2	Q96T91	129 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	REG4	Q9BYZ8	158 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	MRPL37	Q9BZE1	423 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	TREM1	Q9NP99	234 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	LYRM2	Q9NU23	88 aa	Predicted RBP	9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	CACNG5	Q9UF02	275 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	IL19	Q9UHD0	177 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	TMA7	Q9Y2S6	64 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	STRAP	Q9Y3F4	350 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	DSCAM	O60469	2012 aa		9.03	□□□□□ -0.96
SPIDR-222	ENST00000524006	TRGV10	A0A0A0MS01	117 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006		A8MXK9	166 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	LGALS8	O00214	317 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	FGF16	O43320	207 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	DFFB	O76075	338 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	IFNA5	P01569	189 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	GZMH	P20718	246 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	SSTR5	P35346	364 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	PPP1CC	P36873	323 aa	Known RBP	9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	CFHR2	P36980	270 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	GATA4	P43694	442 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	GLIPR1	P48060	266 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	SULT1A2	P50226	295 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	ASCL1	P50553	236 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	RAB5C	P51148	216 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	F2RL1	P55085	397 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	CLINT1	Q14677	625 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006		Q3ZCU0	254 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	PRR30	Q53SZ7	412 aa	Predicted RBP	9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	C1orf87	Q8N0U7	546 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	GCSAM	Q8N6F7	178 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	CD177	Q8N6Q3	437 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	C14orf79	Q96F83	325 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	LINC00052	Q96N35	136 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	HSD17B10	Q99714	261 aa	Known RBP	9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	KRTAP3-3	Q9BYR6	98 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	KRTAP3-2	Q9BYR7	98 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	ESRP2	Q9H6T0	727 aa	Known RBP	9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	SEBOX	Q9HB31	216 aa	Predicted RBP	9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	JPT1	Q9UK76	154 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	PSG11	Q9UQ72	335 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	ZNF835	Q9Y2P0	537 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	CACNA1D	Q01668	2161 aa		9.02	□□□□□ -0.97
SPIDR-222	ENST00000524006	CELSR2	Q9HCU4	2923 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	IGHV3-43	A0A0B4J1X8	118 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	FAM24A	A6NFZ4	105 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	RBMXL2	O75526	392 aa	Known RBP	9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	CLDN1	O95832	211 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	TSPAN15	O95858	294 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	IGHV1-46	P01743	117 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	TFF1	P04155	84 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	HEXA	P06865	529 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	SEC11B	P0C7V7	166 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	IGHV3-43D	P0DP04	118 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	OMG	P23515	440 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	CCKAR	P32238	428 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	LPAR6	P43657	344 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	RAB2A	P61019	212 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	ERVK-16	P61578	105 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	HBG1	P69891	147 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	HBG2	P69892	147 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	HTD2	P86397	168 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	PAX5	Q02548	391 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	BSPH1	Q075Z2	132 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	ZNF616	Q08AN1	781 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	KLRB1	Q12918	225 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	OR2B11	Q5JQS5	317 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	ZNF66	Q6ZN08	573 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006		Q6ZRG5	221 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	STPG2	Q8N412	459 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	LILRB2	Q8N423	598 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	TPRX1	Q8N7U7	411 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	HSD17B11	Q8NBQ5	300 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	OR13A1	Q8NGR1	328 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	GPR146	Q96CH1	333 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	GNPNAT1	Q96EK6	184 aa	Predicted RBP	9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	VKORC1	Q9BQB6	163 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	HRH4	Q9H3N8	390 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	ZNF665	Q9H7R5	613 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	RNF150	Q9ULK6	438 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	CRYBG3	Q68DQ2	2970 aa		9.01	□□□□□ -0.97
SPIDR-222	ENST00000524006	IGKV1D-17	A0A075B6S4	117 aa		9	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms