RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SNURFLB1AK76 121 aa13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 J3QR06 171 aa13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 RIGQ13278 110 aa13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 Q1RN00 199 aa13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 C16orf82Q7Z2V1 217 aa13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 WNT2BQ93097 391 aa13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 SLC2A8Q9NY64 477 aa13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 GNG7O60262 68 aa13.96□□□□□ -0.18
HMGXB3-202ENST00000503427 OR8B3Q8NGG8 313 aa13.96□□□□□ -0.18
HMGXB3-202ENST00000503427 OR8B2Q96RD0 313 aa13.96□□□□□ -0.18
HMGXB3-202ENST00000503427 NPVFQ9HCQ7 196 aa13.96□□□□□ -0.18
HMGXB3-202ENST00000503427 WIPI2Q9Y4P8 454 aa13.96□□□□□ -0.18
HMGXB3-202ENST00000503427 NPTNQ9Y639 398 aa13.96□□□□□ -0.18
HMGXB3-202ENST00000503427 LNP1A1A4G5 178 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 MPDU1O75352 247 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 IGHMP01871 453 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 HIST1H1EP10412 219 aaKnown RBP13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 IER3P46695 156 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 C19orf48Q6RUI8 117 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 C5orf17Q8NAS9 161 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 OR2T8A6NH00 312 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 SMPD2O60906 423 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 PRDX2P32119 198 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 RPL13AP40429 203 aaKnown RBP13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 COL10A1Q03692 680 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 OR1L1Q8NH94 360 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 TXNDC17Q9BRA2 123 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 PDCD11Q14690 1871 aaKnown RBP13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 TIAF1O95411 115 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 SCTP09683 121 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 C5orf66Q9H5L9 145 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 EP300Q09472 2414 aaPredicted RBP13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 CCL21O00585 134 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 CSRP2Q16527 193 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 RASL11BQ9BPW5 248 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 IL19Q9UHD0 177 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 GVINP1Q7Z2Y8 2422 aa13.95□□□□□ -0.18
HMGXB3-202ENST00000503427 CSN3P07498 182 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 PPP1R32Q7Z5V6 425 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 ISLRO14498 428 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 MGST3O14880 152 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 RAB29O14966 203 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 PRR7Q8TB68 274 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 MARS2Q96GW9 593 aaKnown RBP13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 IGKV3D-11A0A0A0MRZ8 115 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 CRYBA2P53672 197 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 MAP1LC3CQ9BXW4 147 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 SEMA7AO75326 666 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 C1QL1O75973 258 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 SGMS2Q8NHU3 365 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 STARD4Q96DR4 205 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 DIRC2Q96SL1 478 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 RSG1Q9BU20 258 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 OR51B2Q9Y5P1 312 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 INSIG2Q9Y5U4 225 aa13.94□□□□□ -0.18
HMGXB3-202ENST00000503427 TMEM14DPA8MWL7 114 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 BRS3P32247 399 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 UCP2P55851 309 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 TMPRSS3P57727 454 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 TGIF1Q15583 401 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 TREM2Q9NZC2 230 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 C1RLQ9NZP8 487 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 LGALS7P47929 136 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 WASHC3Q9Y3C0 194 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 FAM157AC9JC47 383 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 SCGB1C2P0DMR2 95 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 SRP14P37108 136 aaKnown RBP13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 MEF2BQ02080 365 aaPredicted RBP13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 Q5BKY6 102 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 APCDD1LQ8NCL9 501 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 TLNRD1Q9H1K6 362 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 ASCL3Q9NQ33 180 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 IL17BQ9UHF5 180 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 SHISA3A0PJX4 238 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 HBZP02008 142 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 APCSP02743 223 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 Q8WTZ3 238 aa13.93□□□□□ -0.18
HMGXB3-202ENST00000503427 PGLYRP1O75594 196 aaPredicted RBP13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 CXorf66Q5JRM2 361 aaPredicted RBP13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 CDCP2Q5VXM1 449 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 Q96M66 194 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 F5H697 171 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 CLDN14O95500 239 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 OR2H2O95918 312 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 THY1P04216 161 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 PET117Q6UWS5 81 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 P2RX4Q99571 388 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 PKIBQ9C010 78 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 IGHV3OR15-7A0A075B7D8 119 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 PRSS1P07477 247 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 EGR4Q05215 589 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 OR2V2Q96R30 315 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 HEXA-AS1Q9H8Q6 139 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 AURKAIP1Q9NWT8 199 aaPredicted RBP13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 TMEM229AB2RXF0 380 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 FAM90A26D6RGX4 464 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 CD8AP01732 235 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 COX5BP10606 129 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 LDLRAD3Q86YD5 345 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 WDFY1Q8IWB7 410 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms