RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 CLUHP3Q96NS8 147 aa12.46□□□□□ -0.41
CHTOP-206ENST00000495554 PBDC1Q9BVG4 233 aa12.46□□□□□ -0.41
CHTOP-206ENST00000495554 EIF5A2Q9GZV4 153 aaKnown RBP12.46□□□□□ -0.41
CHTOP-206ENST00000495554 LIN7CQ9NUP9 197 aaKnown RBP12.46□□□□□ -0.41
CHTOP-206ENST00000495554 PPP1R3CQ9UQK1 317 aa12.46□□□□□ -0.41
CHTOP-206ENST00000495554 C1QTNF9BB2RNN3 333 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 MLNRO43193 412 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 TNFSF13O75888 250 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 NXPH3O95157 252 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 PTBP3O95758 552 aaKnown RBP12.46□□□□□ -0.42
CHTOP-206ENST00000495554 CD200P41217 278 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 DYNLT3P51808 116 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 PAX9P55771 341 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 LBHQ53QV2 105 aaPredicted RBP12.46□□□□□ -0.42
CHTOP-206ENST00000495554 TGIF2LXQ8IUE1 241 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 GNPNAT1Q96EK6 184 aaPredicted RBP12.46□□□□□ -0.42
CHTOP-206ENST00000495554 RAB40CQ96S21 281 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 CXXC4Q9H2H0 198 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 KCNIP1Q9NZI2 227 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 OR14J1Q9UGF5 321 aa12.46□□□□□ -0.42
CHTOP-206ENST00000495554 PTPRZ1P23471 2315 aaPredicted RBP12.46□□□□□ -0.42
CHTOP-206ENST00000495554 K7EM74 188 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 WDR1O75083 606 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 CGAP01215 116 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 RPL23AP62750 156 aaKnown RBP12.45□□□□□ -0.42
CHTOP-206ENST00000495554 TMEM217Q8N7C4 229 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 MEGF10Q96KG7 1140 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 LRFN3Q9BTN0 628 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 KCNS2Q9ULS6 477 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 TMEM30CPA0ZSE6 113 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 KIAA1324LA8MWY0 1029 aaPredicted RBP12.45□□□□□ -0.42
CHTOP-206ENST00000495554 PSPNO60542 156 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 NFYBP25208 207 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 C11orf53Q8IXP5 236 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 ZNF610Q8N9Z0 462 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 STARD4Q96DR4 205 aa12.45□□□□□ -0.42
CHTOP-206ENST00000495554 IGKV1-39P01597 117 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 IGKV1D-39P04432 117 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 CECR9P0C854 216 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 KITLGP21583 273 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 HABP2Q14520 560 aaPredicted RBP12.44□□□□□ -0.42
CHTOP-206ENST00000495554 RBMS3Q6XE24 437 aaKnown RBP12.44□□□□□ -0.42
CHTOP-206ENST00000495554 Q6ZS92 163 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 UBALD1Q8TB05 177 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 WSB1Q9Y6I7 421 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 A0A1B0GW64 132 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 TIMM8AO60220 97 aaPredicted RBP12.44□□□□□ -0.42
CHTOP-206ENST00000495554 IGLV1-44P01699 117 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 Q6ZRM9 215 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 ZNF826PQ6ZT77 177 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 CXorf67Q86X51 503 aaPredicted RBP12.44□□□□□ -0.42
CHTOP-206ENST00000495554 FAM216AQ8WUB2 273 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 GALMQ96C23 342 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 ATP5SQ99766 215 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 SEBOXQ9HB31 216 aaPredicted RBP12.44□□□□□ -0.42
CHTOP-206ENST00000495554 CACNG5Q9UF02 275 aa12.44□□□□□ -0.42
CHTOP-206ENST00000495554 RNF212BA8MTL3 300 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 DFFBO76075 338 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 CEBPDP49716 269 aaPredicted RBP12.43□□□□□ -0.42
CHTOP-206ENST00000495554 SULT1A1P50225 295 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 P2RY6Q15077 328 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 ZNF718Q3SXZ3 478 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 ZNF585BQ52M93 769 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 SLC35E4Q6ICL7 350 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 ETFRF1Q6IPR1 90 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 C1orf174Q8IYL3 243 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 DRAM1Q8N682 238 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 SMDT1Q9H4I9 107 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 ZNF71Q9NQZ8 489 aaPredicted RBP12.43□□□□□ -0.42
CHTOP-206ENST00000495554 A6NLC8 198 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 KLK10O43240 276 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 GCH1P30793 250 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 ACP7Q6ZNF0 438 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 REC114Q7Z4M0 266 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 PRR7Q8TB68 274 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 PROCRQ9UNN8 238 aa12.43□□□□□ -0.42
CHTOP-206ENST00000495554 MED19A0JLT2 244 aaPredicted RBP12.42□□□□□ -0.42
CHTOP-206ENST00000495554 WNT9BO14905 357 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 SYNGR2O43760 224 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 IGKV1-5P01602 117 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
CHTOP-206ENST00000495554 PPP1CCP36873 323 aaKnown RBP12.42□□□□□ -0.42
CHTOP-206ENST00000495554 FABP6P51161 128 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 IZUMO4Q1ZYL8 232 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 WDR82Q6UXN9 313 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 RBMXL3Q8N7X1 1067 aaKnown RBP12.42□□□□□ -0.42
CHTOP-206ENST00000495554 ZBTB34Q8NCN2 500 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 SLC35B3Q9H1N7 401 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 RNF24Q9Y225 148 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 RFNGQ9Y644 331 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 DCHS1Q96JQ0 3298 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
CHTOP-206ENST00000495554 BTBD17A6NE02 478 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
CHTOP-206ENST00000495554 OOEPA6NGQ2 149 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
CHTOP-206ENST00000495554 RD3LP0DJH9 198 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 OR3A1P47881 315 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 MBNL2Q5VZF2 373 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms