RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 KMT2CQ8NEZ4 4911 aaKnown RBP0.94□□□□□ -2.26
ITGB1-216ENST00000493758 EPPK1P58107 5090 aaKnown RBP0.94□□□□□ -2.26
ITGB1-216ENST00000493758 NAV3Q8IVL0 2385 aa0.94□□□□□ -2.26
ITGB1-216ENST00000493758 TRPM3Q9HCF6 1732 aaPredicted RBP0.94□□□□□ -2.26
ITGB1-216ENST00000493758 SPENQ96T58 3664 aaKnown RBP0.94□□□□□ -2.26
ITGB1-216ENST00000493758 CUX1P39880 1505 aa0.94□□□□□ -2.26
ITGB1-216ENST00000493758 MUC2Q02817 5179 aa0.94□□□□□ -2.26
ITGB1-216ENST00000493758 K7ERQ8 282 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 SULT1C2O00338 296 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 FGF16O43320 207 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 SGCEO43556 437 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 TNFAIP8O95379 198 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 NAPSAO96009 420 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 GPX1P07203 203 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 RCVRNP35243 200 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 MP68P56378 58 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 RAB2AP61019 212 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 RAB31Q13636 194 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 SYCP1Q15431 976 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 OR10J3Q5JRS4 329 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 PDCD6IPQ8WUM4 868 aaKnown RBP0.93□□□□□ -2.26
ITGB1-216ENST00000493758 CCDC127Q96BQ5 260 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 SERPINB11Q96P15 392 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 FBXL15Q9H469 300 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 DMAC2Q9NW81 257 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 COMMD9Q9P000 198 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 PRO2289Q9P1D8 64 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 ENPP5Q9UJA9 477 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 SCML1Q9UN30 329 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 POFUT2Q9Y2G5 429 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 WASHC3Q9Y3C0 194 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 FRYLO94915 3013 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 MAP1BP46821 2468 aaKnown RBP0.93□□□□□ -2.26
ITGB1-216ENST00000493758 KIAA0556O60303 1618 aa0.93□□□□□ -2.26
ITGB1-216ENST00000493758 PXDNLA1KZ92 1463 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 USP42Q9H9J4 1324 aaKnown RBP0.92□□□□□ -2.26
ITGB1-216ENST00000493758 LAMA5O15230 3695 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 LAMC3Q9Y6N6 1575 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 WIZO95785 1651 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 MYOM1P52179 1685 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 A0A1B0GX12 115 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 FAM25EA8MYX2 175 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 EFCAB9A8MZ26 197 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 H3BSA7 217 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 TOR1AO14656 332 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 EPPINO95925 133 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 OR4A8P0C604 315 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 GABRA3P34903 492 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 ACTR1BP42025 376 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 LPAR6P43657 344 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 HADHBP55084 474 aaKnown RBP0.92□□□□□ -2.26
ITGB1-216ENST00000493758 TMED1Q13445 227 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 PAFAH1B3Q15102 231 aaKnown RBP0.92□□□□□ -2.26
ITGB1-216ENST00000493758 TMEM249Q2WGJ8 235 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 FAM201AQ5SY85 155 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 COPS6Q7L5N1 327 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 ZBTB8OSQ8IWT0 167 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 SYCE1Q8N0S2 351 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 C17orf78Q8N4C9 275 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 ATP6V1C2Q8NEY4 427 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 CCDC12Q8WUD4 166 aaPredicted RBP0.92□□□□□ -2.26
ITGB1-216ENST00000493758 CFAP53Q96M91 514 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 MBOAT7Q96N66 472 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 UPK3BQ9BT76 320 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 POTEKPQ9BYX7 375 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 CYSTM1Q9H1C7 97 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 NDUFB11Q9NX14 153 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 COL6A5A8TX70 2615 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 TPRP12270 2363 aaKnown RBP0.92□□□□□ -2.26
ITGB1-216ENST00000493758 BIVM-ERCC5R4GMW8 1640 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 NF1P21359 2839 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 POLQO75417 2590 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 CELSR2Q9HCU4 2923 aa0.92□□□□□ -2.26
ITGB1-216ENST00000493758 SPG11Q96JI7 2443 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 SYNJ1O43426 1573 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 EIF4G3O43432 1585 aaKnown RBP0.91□□□□□ -2.26
ITGB1-216ENST00000493758 KDM5CP41229 1560 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 NWD1Q149M9 1564 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 PTPRJQ12913 1337 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 MAP3K19Q56UN5 1328 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 ZFYVE26Q68DK2 2539 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 TRPM6Q9BX84 2022 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 ERICH2A1L162 156 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 B4DEV8 164 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 K7EQS6 105 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 PHYHO14832 338 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 LIN7AO14910 233 aaPredicted RBP0.91□□□□□ -2.26
ITGB1-216ENST00000493758 POLR3GO15318 223 aaPredicted RBP0.91□□□□□ -2.26
ITGB1-216ENST00000493758 UGT2B11O75310 529 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 CRYGDP07320 174 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 FBP1P09467 338 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 SLC35E2BP0CK96 405 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 CD36P16671 472 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 SYT1P21579 422 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 PSMA1P25786 263 aaKnown RBP0.91□□□□□ -2.26
ITGB1-216ENST00000493758 SULT1A2P50226 295 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 OR10A3P58181 314 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 GABARAPL2P60520 117 aa0.91□□□□□ -2.26
ITGB1-216ENST00000493758 DYNLL1P63167 89 aaKnown RBP0.91□□□□□ -2.26
ITGB1-216ENST00000493758 TSPAN31Q12999 210 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms