RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZNF525Q8N782 197 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 BCL2L2Q92843 193 aaPredicted RBP9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 B4GALT7Q9UBV7 327 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 TDRD6O60522 2096 aaKnown RBP9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 SPTY2D1-AS1A0A0U1RR47 76 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 SLC22A20A6NK97 555 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 FAM157AC9JC47 383 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 CD55P08174 381 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 GDF1P27539 372 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 C20orf144Q9BQM9 153 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 MAP1BP46821 2468 aaKnown RBP9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 TRBV9A0A0B4J1U6 114 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 PFN1P07737 140 aaKnown RBP9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 SSR4P51571 173 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 UCP2P55851 309 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 GABRA6Q16445 453 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 TRIM61Q5EBN2 209 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 MMD2Q8IY49 270 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 RTL8AQ9BWD3 113 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 NRN1Q9NPD7 142 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 LILRA5A6NI73 299 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 TNFSF11O14788 317 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 S1PR2O95136 353 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 OR10J4P0C629 311 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 FAM122AQ96E09 287 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 SPACA9Q96E40 222 aaPredicted RBP9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 VSIRQ9H7M9 311 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 CDC42EP3Q9UKI2 254 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 TIMM9Q9Y5J7 89 aa9.71□□□□□ -0.85
CRNKL1-204ENST00000490910 IGHV3-64DA0A0J9YX35 117 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 ITGB1BP1O14713 200 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 GRPP07492 148 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 GPR12P47775 334 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 TRA2AQ13595 282 aaKnown RBP eCLIP9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 RNF144BQ7Z419 303 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 RABEPKQ7Z6M1 372 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 SSMEM1Q8WWF3 244 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 WNT5BQ9H1J7 359 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 OR2D2Q9H210 308 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 B3GAT1Q9P2W7 334 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 ATP23Q9Y6H3 246 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 ESPL1Q14674 2120 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 WDR90Q96KV7 1748 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 A0A096LPE4 126 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 TRAV38-1A0A0B4J264 116 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 A0A1W2PPZ6 126 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 CXCL13O43927 109 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 GNG3P63215 75 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 ST6GALNAC3Q8NDV1 305 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 GABRG3Q99928 467 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 SH2D2AQ9NP31 389 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 PLA2G2EQ9NZK7 142 aa9.71□□□□□ -0.86
CRNKL1-204ENST00000490910 ARHGEF17Q96PE2 2063 aaPredicted RBP9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 A6NDN8 102 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 G6PCP35575 357 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 UNQ5815/PRO19632Q6UWF5 114 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 YRDCQ86U90 279 aaKnown RBP9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 BPIFA4PQ86YQ2 179 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 OR4P4Q8NGL7 312 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 C1QTNF9BB2RNN3 333 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 GDF9O60383 454 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 IGHEP01854 428 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 ACSM6Q6P461 480 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 ERASQ7Z444 233 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 CALHM1Q8IU99 346 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 ORAOV1Q8WV07 137 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 LSM10Q969L4 123 aaKnown RBP9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 TMEM167BQ9NRX6 74 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 FANCMQ8IYD8 2048 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 TRAV39A0A0B4J263 110 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 FAM90A26D6RGX4 464 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 BMPR1BO00238 502 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 CD1BP29016 333 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 MFAP2P55001 183 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 GNB2P62879 340 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 SCGB2A2Q13296 93 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 FNDC7Q5VTL7 733 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 PARM1Q6UWI2 310 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 RBMXL3Q8N7X1 1067 aaKnown RBP9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 RAB9BQ9NP90 201 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 TAAR3PQ9P1P4 343 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 HSPB7Q9UBY9 170 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 MED12Q93074 2177 aa9.7□□□□□ -0.86
CRNKL1-204ENST00000490910 LTBP4Q8N2S1 1624 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 C1QTNF9P0C862 333 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 EDDM3AQ14507 147 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 PSG5Q15238 335 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 SNAI3Q3KNW1 292 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 NUDT11Q96G61 164 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 LRRC61Q9BV99 259 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 IL36BQ9NZH7 164 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 ZNF319Q9P2F9 582 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 CHD3Q12873 2000 aaKnown RBP9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 VHLLQ6RSH7 139 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 MAP1LC3CQ9BXW4 147 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 SAP30LQ9HAJ7 183 aa9.69□□□□□ -0.86
CRNKL1-204ENST00000490910 TEX50A0A1B0GTY4 177 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms