RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MAGIXQ9H6Y5 334 aa10.07□□□□□ -0.8
EXOSC3-207ENST00000490516 ZNF556Q9HAH1 456 aa10.07□□□□□ -0.8
EXOSC3-207ENST00000490516 RAB9BQ9NP90 201 aa10.07□□□□□ -0.8
EXOSC3-207ENST00000490516 UBQLN2Q9UHD9 624 aa10.07□□□□□ -0.8
EXOSC3-207ENST00000490516 KIR2DL5BA0A0G2JN68 375 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 KIR2DL5BA0A0G2JPC4 375 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 C16orf90A8MZG2 172 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 PPP5D1E7EU14 171 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 H0YJW9 148 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 DEFB4AO15263 64 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 CCDC22O60826 627 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 HLA-AP01891 365 aaKnown RBP10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 OR2T7P0C7T2 308 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 APELAP0DMC3 54 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 LGALS7P47929 136 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 PJVKQ0ZLH3 352 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 RPL39P5Q59GN2 51 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 C6orf183Q5T699 404 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 NXNL2Q5VZ03 156 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 KIR2DL5AQ8N109 375 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 OR52N1Q8NH53 320 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 KIR2DL5BQ8NHK3 375 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 CMTM5Q96DZ9 223 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 TAF9BQ9HBM6 251 aa10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 APOBP04114 4563 aaKnown RBP10.06□□□□□ -0.8
EXOSC3-207ENST00000490516 OR5H14A6NHG9 310 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 SNX3O60493 162 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 RBBP9O75884 186 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 CST1P01037 141 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 CRISP1P54107 249 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 RPS16P62249 146 aaKnown RBP10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 RIPK1Q13546 671 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 NHLRC3Q5JS37 347 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 FAM220AQ7Z4H9 259 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 THRSPQ92748 146 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 CYYR1Q96J86 154 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 RARRES2Q99969 163 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 IFI27L2Q9H2X8 130 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 C11orf68Q9H3H3 251 aaKnown RBP10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 ZNF230Q9UIE0 474 aaPredicted RBP10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 WASHC3Q9Y3C0 194 aa10.05□□□□□ -0.8
EXOSC3-207ENST00000490516 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 FAM90A23PA8MXZ1 464 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 H3BNX3 289 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 ST8SIA5O15466 376 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 MC5RP33032 325 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 ZNF85Q03923 595 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 GK3PQ14409 553 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 PTGES3Q15185 160 aaKnown RBP10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 POM121L12Q8N7R1 296 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 OR5D14Q8NGL3 314 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 OR1L6Q8NGR2 347 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 AKIP1Q9NQ31 210 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 ENOPH1Q9UHY7 261 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 DMRT1Q9Y5R6 373 aa10.04□□□□□ -0.8
EXOSC3-207ENST00000490516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 HMGB1P1B2RPK0 211 aaPredicted RBP10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 LGALS9O00182 355 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 YPEL1O60688 119 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 OR2C1O95371 312 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 PRH1P02810 166 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 MAS1P04201 325 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 IGKV1-16P04430 117 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 SERPINA2P20848 420 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 RHOGP84095 191 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 EFNB1P98172 346 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 LGALS9BQ3B8N2 356 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 FAM98BQ52LJ0 330 aaKnown RBP10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 TRAT1Q6PIZ9 186 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 BTNL8Q6UX41 500 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 ZDHHC13Q8IUH4 622 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 SERPINA12Q8IW75 414 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 UXS1Q8NBZ7 420 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 OR2AK2Q8NG84 335 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 OR5AN1Q8NGI8 311 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 OR51A2Q8NGJ7 313 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 TMEM163Q8TC26 289 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 IL4I1Q96RQ9 567 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 RNF5Q99942 180 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
EXOSC3-207ENST00000490516 A0A1W2PP11 408 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 TMEM213A2RRL7 107 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 C11orf94C9JXX5 98 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 S1PR2O95136 353 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 EPHA2P29317 976 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 ATP5G2Q06055 141 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 MPV17LQ2QL34 196 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 DMKNQ6E0U4 476 aaPredicted RBP10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 FAM71F2Q6NXP2 309 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 FDX2Q6P4F2 183 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 LINC00596Q86U02 117 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 GAPTQ8N292 157 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 OR2C3Q8N628 320 aa10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 ADAD2Q8NCV1 583 aaKnown RBP10.02□□□□□ -0.81
EXOSC3-207ENST00000490516 OR11H2Q8NH07 326 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms