RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, human

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-206	ENST00000487602		B4DSR2	109 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602		J3QR06	171 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	PGLYRP1	O75594	196 aa	Predicted RBP	6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	IGLV2-14	P01704	120 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	OR4E1	P0C645	316 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	GNG10	P50151	68 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	PIGP	P57054	158 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	PAX8	Q06710	450 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	TATDN3	Q17R31	274 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	C4orf46	Q504U0	113 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	PHLDA2	Q53GA4	152 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	TMEM128	Q5BJH2	165 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	METTL11B	Q5VVY1	283 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	BTNL3	Q6UXE8	466 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	CMTM1	Q8IZ96	169 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	DRAM1	Q8N682	238 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	ZNF645	Q8N7E2	425 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	CCDC71L	Q8N9Z2	235 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	BVES	Q8NE79	360 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	OR13D1	Q8NGV5	346 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	OR9G1	Q8NH87	305 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	CAPSL	Q8WWF8	208 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	ABHD14B	Q96IU4	210 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	SEC22C	Q9BRL7	303 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	OR2D2	Q9H210	308 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	IFI27L2	Q9H2X8	130 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	GHITM	Q9H3K2	345 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	METTL8	Q9H825	291 aa	Known RBP	6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	HEXA-AS1	Q9H8Q6	139 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	UNKL	Q9H9P5	680 aa	Known RBP	6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	LPAR2	Q9HBW0	351 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	GPN1	Q9HCN4	374 aa	Predicted RBP	6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	SLC2A9	Q9NRM0	540 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	SDHAF2	Q9NX18	166 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	KCNS2	Q9ULS6	477 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	INSIG2	Q9Y5U4	225 aa		6.54	□□□□□ -1.36
RBM28-206	ENST00000487602	SETX	Q7Z333	2677 aa	Known RBP	6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	FLNB	O75369	2602 aa	Known RBP	6.53	□□□□□ -1.36
RBM28-206	ENST00000487602		A0A0A6YYJ9	748 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	IGHV2-26	A0A0B4J1V2	119 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	C9orf170	A2RU37	121 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	C7orf66	A4D0T2	115 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	CRYM-AS1	A6NIL9	109 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	SNRPGP15	A8MWD9	76 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	TOR1A	O14656	332 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	RAB29	O14966	203 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	MPPED1	O15442	326 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	PROP1	O75360	226 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	TOX4	O94842	621 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	SFT2D2	O95562	160 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	MSMB	P08118	114 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	MMP9	P14780	707 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	S100G	P29377	79 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	GPR12	P47775	334 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	PRRX1	P54821	245 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	DLX1	P56177	255 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	PPP1R1A	Q13522	171 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	EIF4EBP1	Q13541	118 aa	Predicted RBP	6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	HCP5	Q6MZN7	132 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	C11orf88	Q6PI97	169 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	KCTD9	Q7L273	389 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	VMO1	Q7Z5L0	202 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	LYG2	Q86SG7	212 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	SGPP2	Q8IWX5	399 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	ODF3L1	Q8IXM7	274 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	CADM3	Q8N126	398 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	PNKD	Q8N490	385 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	LINC01356	Q8N9X3	169 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	WFDC11	Q8NEX6	87 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	OR52B4	Q8NGK2	314 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	ZNF431	Q8TF32	576 aa	Predicted RBP	6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	TNFRSF14	Q92956	283 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	GALNT14	Q96FL9	552 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	C5orf30	Q96GV9	206 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	TBX15	Q96SF7	602 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	CLEC7A	Q9BXN2	247 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	OR51J1	Q9H342	316 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	NAA60	Q9H7X0	242 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	SIRT7	Q9NRC8	400 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	PIPOX	Q9P0Z9	390 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	KCNIP3	Q9Y2W7	256 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	CCDC168	Q8NDH2	2452 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	CSMD1	Q96PZ7	3565 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	PDZD2	O15018	2839 aa		6.53	□□□□□ -1.36
RBM28-206	ENST00000487602	hCG_2014768	A0A024R1R8	64 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	TRAV20	A0A0B4J274	112 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	TNFSF12	O43508	249 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	CREBL2	O60519	120 aa	Predicted RBP	6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	IGLV1-47	P01700	117 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	IGHV4-31	P0DP07	118 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	GATA3	P23771	443 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	COX7A1	P24310	79 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	GZMK	P49863	264 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	BCAP31	P51572	246 aa		6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	SUPT4H1	P63272	117 aa	Known RBP	6.52	□□□□□ -1.37
RBM28-206	ENST00000487602	PRB3	Q04118	309 aa	Predicted RBP	6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 80 ms