RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 MMDQ15546 238 aa11.32□□□□□ -0.6
CLDN11-207ENST00000486975 C5orf24Q7Z6I8 188 aa11.32□□□□□ -0.6
CLDN11-207ENST00000486975 ZNF695Q8IW36 515 aa11.32□□□□□ -0.6
CLDN11-207ENST00000486975 P2RX4Q99571 388 aa11.32□□□□□ -0.6
CLDN11-207ENST00000486975 HSPB9Q9BQS6 159 aa11.32□□□□□ -0.6
CLDN11-207ENST00000486975 MRPL20Q9BYC9 149 aaKnown RBP11.32□□□□□ -0.6
CLDN11-207ENST00000486975 CHMP1AQ9HD42 196 aaPredicted RBP11.32□□□□□ -0.6
CLDN11-207ENST00000486975 C12orf4Q9NQ89 552 aa11.32□□□□□ -0.6
CLDN11-207ENST00000486975 PIPOXQ9P0Z9 390 aa11.32□□□□□ -0.6
CLDN11-207ENST00000486975 RAB26Q9ULW5 256 aa11.32□□□□□ -0.6
CLDN11-207ENST00000486975 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
CLDN11-207ENST00000486975 IGHG4P01861 327 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 OR5H8P0DN80 308 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 TMEM50BP56557 158 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 ACTBP60709 375 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 HLA-DRB3P79483 266 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 CD200R1LQ6Q8B3 271 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 MRAPQ8TCY5 172 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 IL1F10Q8WWZ1 152 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 FAM3DQ96BQ1 224 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 CNBD2Q96M20 576 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 ZNF251Q9BRH9 671 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 SLC23A1Q9UHI7 598 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 ZNF107Q9UII5 783 aaPredicted RBP11.31□□□□□ -0.6
CLDN11-207ENST00000486975 AK3Q9UIJ7 227 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 V9GY05 133 aa11.31□□□□□ -0.6
CLDN11-207ENST00000486975 TRAV1-2A0A0B4J238 106 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 NUDT19A8MXV4 375 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 RAB29O14966 203 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 VDAC1P21796 283 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 GALP22466 123 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 OR3A3P47888 321 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
CLDN11-207ENST00000486975 GABARAPL2P60520 117 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 EGFEM1PQ0D2K5 195 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 SSX1Q16384 188 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 CXorf66Q5JRM2 361 aaPredicted RBP11.3□□□□□ -0.6
CLDN11-207ENST00000486975 C18orf65Q6ZTR6 163 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 C8orf86Q6ZUL3 223 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 KLHL30-AS1Q8NEE0 82 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 NPBQ8NG41 125 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 OR56B1Q8NGI3 324 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 MCRIP2Q9BUT9 160 aaKnown RBP11.3□□□□□ -0.6
CLDN11-207ENST00000486975 Q9N2K0 584 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 NDUFB11Q9NX14 153 aa11.3□□□□□ -0.6
CLDN11-207ENST00000486975 OR5H14A6NHG9 310 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 PDCD5O14737 125 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 NBR2O15453 112 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 DENRO43583 198 aaKnown RBP11.29□□□□□ -0.6
CLDN11-207ENST00000486975 NDUFA3O95167 84 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 RPLP1P05386 114 aaKnown RBP11.29□□□□□ -0.6
CLDN11-207ENST00000486975 ZBTB25P24278 435 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 PSMB8P28062 276 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 VEGFCP49767 419 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 CLDN12P56749 244 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 C5orf64Q2M2E5 130 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 C2orf76Q3KRA6 126 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 Q8N3U1 123 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 SETD6Q8TBK2 473 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 PTX4Q96A99 478 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 ARHGAP5-AS1Q96IT6 56 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
CLDN11-207ENST00000486975 PECRQ9BY49 303 aa11.29□□□□□ -0.6
CLDN11-207ENST00000486975 DNAH3Q8TD57 4116 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 TRDV1A0A1B0GX56 115 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
CLDN11-207ENST00000486975 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
CLDN11-207ENST00000486975 MC5RP33032 325 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 KIR2DS1Q14954 304 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 PLAC9Q5JTB6 97 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 OR8U1Q8NH10 309 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 RITA1Q96K30 269 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
CLDN11-207ENST00000486975 PARP12Q9H0J9 701 aaKnown RBP11.28□□□□□ -0.6
CLDN11-207ENST00000486975 OR51J1Q9H342 316 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 RAB22AQ9UL26 194 aa11.28□□□□□ -0.6
CLDN11-207ENST00000486975 IGHV7-81A0A0B4J1V7 117 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 TMEM272A0A1B0GTI8 110 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 IFITM5A6NNB3 132 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 CCL24O00175 119 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 RBBP9O75884 186 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 DIRAS3O95661 229 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 CT45A6P0DMU7 189 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 CT45A5P0DMU8 189 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 CT45A7P0DMV0 189 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 LIN54Q6MZP7 749 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 FAM131AQ6UXB0 335 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 DPF1Q92782 380 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.61
CLDN11-207ENST00000486975 RAX2Q96IS3 184 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 RNF5Q99942 180 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 TOLLIPQ9H0E2 274 aa11.27□□□□□ -0.61
CLDN11-207ENST00000486975 C11orf54Q9H0W9 315 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms