RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 DPAGT1Q9H3H5 408 aa9.54□□□□□ -0.88
APTX-227ENST00000485479 COL6A5A8TX70 2615 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 IGKV1D-13A0A0B4J2D9 117 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 TRIM77I1YAP6 450 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 ZNF701M0R085 212 aaPredicted RBP9.53□□□□□ -0.88
APTX-227ENST00000485479 PROP1O75360 226 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 RGS11O94810 467 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 LPLP06858 475 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 RNASE1P07998 156 aaKnown RBP9.53□□□□□ -0.88
APTX-227ENST00000485479 IGKV1-13P0DP09 117 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 HES1Q14469 280 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 TGIF2LXQ8IUE1 241 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 GPX8Q8TED1 209 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 CAPSLQ8WWF8 208 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 CFHR4Q92496 578 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 CMTM3Q96MX0 182 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 TCF19Q9Y242 345 aa9.53□□□□□ -0.88
APTX-227ENST00000485479 RBM7Q9Y580 266 aaKnown RBP9.53□□□□□ -0.88
APTX-227ENST00000485479 VGLL3A8MV65 326 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 IGKV1D-33P01593 117 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 IGKV1-33P01594 117 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 HRH1P35367 487 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 HABP2Q14520 560 aaPredicted RBP9.52□□□□□ -0.89
APTX-227ENST00000485479 Q3ZCU0 254 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 FAAP20Q6NZ36 180 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 Q6ZS46 218 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 Q6ZS49 121 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 H1FOOQ8IZA3 346 aaPredicted RBP9.52□□□□□ -0.89
APTX-227ENST00000485479 ZNF251Q9BRH9 671 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 SIGLEC9Q9Y336 463 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 POMT1Q9Y6A1 747 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 A0A0A6YYJ9 748 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 M0QYG6 137 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 FXYD4P59646 89 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 TMEM30BQ3MIR4 351 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 HIST2H2BDQ6DRA6 164 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 LYSMD2Q8IV50 215 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 C8orf31Q8N9H6 132 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 EHFQ9NZC4 300 aa9.52□□□□□ -0.89
APTX-227ENST00000485479 TENM1Q9UKZ4 2725 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 A6NHS1 94 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 CLDN34H7C241 214 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 PEX14O75381 377 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 GAPDHP04406 335 aaKnown RBP9.51□□□□□ -0.89
APTX-227ENST00000485479 OR5H8P0DN80 308 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 IL3RAP26951 378 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 FCGR2CP31995 323 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 GPR12P47775 334 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 ZNF816Q0VGE8 651 aaPredicted RBP9.51□□□□□ -0.89
APTX-227ENST00000485479 FAM131AQ6UXB0 335 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 TMEM17Q86X19 198 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 OR5AP2Q8NGF4 316 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 OR4D10Q8NGI6 311 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 FAM216AQ8WUB2 273 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 RITA1Q96K30 269 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 ADAM30Q9UKF2 790 aa9.51□□□□□ -0.89
APTX-227ENST00000485479 A6NDX4 124 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 LANCL1O43813 399 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 AADACP22760 399 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 RAB7AP51149 207 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 ZNF137PP52743 207 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 BLCAPP62952 87 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 SRSF7Q16629 238 aaKnown RBP eCLIP9.5□□□□□ -0.89
APTX-227ENST00000485479 TMEM95Q3KNT9 176 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 DHRS7BQ6IAN0 325 aaPredicted RBP9.5□□□□□ -0.89
APTX-227ENST00000485479 CCDC144NLQ6NUI1 221 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 ZNF833PQ6ZTB9 187 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 OR5R1Q8NH85 324 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 EDARADDQ8WWZ3 215 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 NECAP2Q9NVZ3 263 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 SDHAF2Q9NX18 166 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 C1RLQ9NZP8 487 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 V9GYH0 126 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 FABP12A6NFH5 140 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 M0R1X1 148 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 RAB29O14966 203 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 TNFSF12O43508 249 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 CT45A6P0DMU7 189 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 CT45A5P0DMU8 189 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 CT45A7P0DMV0 189 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 MDKP21741 143 aaPredicted RBP9.5□□□□□ -0.89
APTX-227ENST00000485479 CNTFRP26992 372 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 BRS3P32247 399 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 CBX5P45973 191 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 LSAMPQ13449 338 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 CDK10Q15131 360 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 CNPY1Q3B7I2 92 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 SECTM1Q8WVN6 248 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 TMEM158Q8WZ71 300 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 NABP2Q9BQ15 211 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 MMP27Q9H306 513 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 NDUFA13Q9P0J0 144 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 PIPOXQ9P0Z9 390 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 ANAPC10Q9UM13 185 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 OR2W1Q9Y3N9 320 aa9.5□□□□□ -0.89
APTX-227ENST00000485479 POM121CA8CG34 1229 aa9.49□□□□□ -0.89
APTX-227ENST00000485479 CD3DP04234 171 aa9.49□□□□□ -0.89
APTX-227ENST00000485479 CRYBA1P05813 215 aa9.49□□□□□ -0.89
APTX-227ENST00000485479 TMEM11P17152 192 aa9.49□□□□□ -0.89
APTX-227ENST00000485479 S100A5P33763 92 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms