RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 CXCL13O43927 109 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 ESDP10768 282 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 TNFSF10P50591 281 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 OR10D3Q8NH80 312 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 TMEM37Q8WXS4 190 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 SNHG12Q9BXW3 62 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.13□□□□□ -0.47
NR1H3-220ENST00000481020 NAGKQ9UJ70 344 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 SZT2Q5T011 3432 aa12.13□□□□□ -0.47
NR1H3-220ENST00000481020 C5orf42Q9H799 3197 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 TNRC6AQ8NDV7 1962 aaKnown RBP12.12□□□□□ -0.47
NR1H3-220ENST00000481020 TRIOBPQ9H2D6 2365 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 A0A1W2PQM1 296 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 J3QW42 95 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 SLC33A1O00400 549 aaPredicted RBP12.12□□□□□ -0.47
NR1H3-220ENST00000481020 PDGFBP01127 241 aaPredicted RBP12.12□□□□□ -0.47
NR1H3-220ENST00000481020 SNRPCP09234 159 aaKnown RBP12.12□□□□□ -0.47
NR1H3-220ENST00000481020 P0C879 139 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 MDKP21741 143 aaPredicted RBP12.12□□□□□ -0.47
NR1H3-220ENST00000481020 PRSS12P56730 875 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 YPEL3P61236 119 aaPredicted RBP12.12□□□□□ -0.47
NR1H3-220ENST00000481020 GNB2P62879 340 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 FGFRL1Q8N441 504 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 NECAP1Q8NC96 275 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 MBNL3Q9NUK0 354 aaKnown RBP12.12□□□□□ -0.47
NR1H3-220ENST00000481020 WIPI2Q9Y4P8 454 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
NR1H3-220ENST00000481020 J3QT63 122 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 MPDU1O75352 247 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 CLDN1O95832 211 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 UMODP07911 640 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 TDGF1P3P51864 188 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 SELENOTP62341 195 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 ZNF497Q6ZNH5 498 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 C20orf204Q6ZNR8 217 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 OR2Y1Q8NGV0 311 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 TMEM204Q9BSN7 226 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 SPTBN5Q9NRC6 3674 aaKnown RBP12.11□□□□□ -0.47
NR1H3-220ENST00000481020 EREGO14944 169 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
NR1H3-220ENST00000481020 IL3RAP26951 378 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 SOX8P57073 446 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 CATR1Q13166 79 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 FFAR4Q5NUL3 377 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 CDCP2Q5VXM1 449 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 ZCCHC14Q8WYQ9 949 aaKnown RBP12.11□□□□□ -0.47
NR1H3-220ENST00000481020 NPCDR1Q9BY65 106 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 KCNIP1Q9NZI2 227 aa12.11□□□□□ -0.47
NR1H3-220ENST00000481020 LRRC30A6NM36 301 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 PMS2P5A8MQ11 134 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 C11orf94C9JXX5 98 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 HS3ST1O14792 307 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 LINC00614P0C842 121 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 MYF5P13349 255 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 EPHA8P29322 1005 aaPredicted RBP12.1□□□□□ -0.47
NR1H3-220ENST00000481020 TRA2AQ13595 282 aaKnown RBP eCLIP12.1□□□□□ -0.47
NR1H3-220ENST00000481020 Q6P435 159 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 GUSBP11Q6P575 273 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 NUFIP2Q7Z417 695 aaKnown RBP12.1□□□□□ -0.47
NR1H3-220ENST00000481020 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 FAM216AQ8WUB2 273 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 MS4A10Q96PG2 267 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 IER2Q9BTL4 223 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 ELOVL1Q9BW60 279 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 SLC25A22Q9H936 323 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 POLDIP2Q9Y2S7 368 aa12.1□□□□□ -0.47
NR1H3-220ENST00000481020 RBM7Q9Y580 266 aaKnown RBP12.1□□□□□ -0.47
NR1H3-220ENST00000481020 RAB29O14966 203 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 SYNGR1O43759 233 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 KLF7O75840 302 aaPredicted RBP12.09□□□□□ -0.47
NR1H3-220ENST00000481020 OR4A8P0C604 315 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 JMJD7P0C870 316 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 CDC34P49427 236 aaPredicted RBP12.09□□□□□ -0.47
NR1H3-220ENST00000481020 TPPP2P59282 170 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 ARF1P84077 181 aaKnown RBP12.09□□□□□ -0.47
NR1H3-220ENST00000481020 PLP2Q04941 152 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 ZNF468Q5VIY5 522 aaPredicted RBP12.09□□□□□ -0.47
NR1H3-220ENST00000481020 TEX38Q6PEX7 206 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 DRAM1Q8N682 238 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 HLA-CQ95604 372 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 CDX2Q99626 313 aaPredicted RBP12.09□□□□□ -0.47
NR1H3-220ENST00000481020 OR1A1Q9P1Q5 309 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 IL36RNQ9UBH0 155 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 PPP1R3CQ9UQK1 317 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 LY96Q9Y6Y9 160 aa12.09□□□□□ -0.47
NR1H3-220ENST00000481020 C5orf49A4QMS7 147 aa12.08□□□□□ -0.47
NR1H3-220ENST00000481020 HSPB6O14558 160 aa12.08□□□□□ -0.47
NR1H3-220ENST00000481020 PAGE4O60829 102 aa12.08□□□□□ -0.47
NR1H3-220ENST00000481020 CLDN14O95500 239 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms