RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525		H3BUX3	64 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	PLXNB1	O43157	2135 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	KCNAB3	O43448	404 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	SSX5	O60225	188 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	GPR137B	O60478	399 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	NDUFA3	O95167	84 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGHV4-59	P01825	116 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	CD74	P04233	296 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	CRYBA1	P05813	215 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	SAA2	P0DJI9	122 aa	Predicted RBP	4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	ELK1	P19419	428 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	OMG	P23515	440 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	COX7A1	P24310	79 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	NFYB	P25208	207 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	RCVRN	P35243	200 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	LGALS7	P47929	136 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF134	P52741	427 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	UCP3	P55916	312 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	TAS2R20	P59543	309 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	PLA2G7	Q13093	441 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	LSAMP	Q13449	338 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	DYRK1A	Q13627	763 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	SPCS2	Q15005	226 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	SURF2	Q15527	256 aa	Predicted RBP	4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	SSX2	Q16385	188 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	KRTAP24-1	Q3LI83	254 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	RUSC1-AS1	Q66K80	236 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	LPCAT3	Q6P1A2	487 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF66	Q6ZN08	573 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	LHFPL4	Q7Z7J7	247 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAM71E2	Q8N5Q1	922 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	COMMD1	Q8N668	190 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF645	Q8N7E2	425 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	NPB	Q8NG41	125 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR4C13	Q8NGP0	309 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR2T10	Q8NGZ9	312 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR1L1	Q8NH94	360 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	NDNF	Q8TB73	568 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF486	Q96H40	463 aa	Predicted RBP	4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	HSD17B10	Q99714	261 aa	Known RBP	4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	NKX3-1	Q99801	234 aa	Predicted RBP	4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	AIFM2	Q9BRQ8	373 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	C19orf24	Q9BVV8	132 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	GON7	Q9BXV9	100 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	WNT10A	Q9GZT5	417 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	KCNK15	Q9H427	330 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	BEX1	Q9HBH7	125 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	NECAP2	Q9NVZ3	263 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	SLC2A8	Q9NY64	477 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	RDH8	Q9NYR8	311 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	MOB4	Q9Y3A3	225 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	TRAV18	A0A075B6X5	111 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525		A0A0B4J203	849 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAM181B	A6NEQ2	426 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	TIMM23	O14925	209 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	HSPA12A	O43301	675 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	CREBL2	O60519	120 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	MOS	P00540	346 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGHG2	P01859	326 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	HLA-DRB1	P01911	266 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGF1	P05019	195 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	EIF4E	P06730	217 aa	Known RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	SCT	P09683	121 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	GSTT2	P0CG29	244 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	GSTT2B	P0CG30	244 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR5H8	P0DN80	308 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	PPP1CC	P36873	323 aa	Known RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	TGFBR1	P36897	503 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	CEACAM6	P40199	344 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	KIR2DS2	P43631	304 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	THBS3	P49746	956 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	LUM	P51884	338 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	RAG2	P55895	527 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	PROK1	P58294	105 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	LSM3	P62310	102 aa	Known RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	MEF2D	Q14814	521 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	CDK10	Q15131	360 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	POU2AF1	Q16633	256 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	TMEM177	Q53S58	311 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	OLFML2A	Q68BL7	652 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	BRICD5	Q6PL45	260 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	SHISA2	Q6UWI4	295 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	DYNAP	Q8N1N2	210 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	BVES	Q8NE79	360 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR2T6	Q8NHC8	308 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	RFESD	Q8TAC1	157 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	OSR1	Q8TAX0	266 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	CD300LF	Q8TDQ1	290 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	CCDC107	Q8WV48	283 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	DDB2	Q92466	427 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	GCDH	Q92947	438 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	SNAPC3	Q92966	411 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	MOB3A	Q96BX8	217 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	ABHD14B	Q96IU4	210 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	TMEM68	Q96MH6	324 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	NABP2	Q9BQ15	211 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	GINS4	Q9BRT9	223 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms