RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 H1FOOQ8IZA3 346 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 SPTSSBQ8NFR3 76 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 C8orf46Q8TAG6 207 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 FGFBP2Q9BYJ0 223 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 FER1L5A0AVI2 2057 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 POLEQ07864 2286 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 SYNGR3O43761 229 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 ID3Q02535 119 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 P2RY6Q15077 328 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 RNF165Q6ZSG1 346 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 NKAPP1Q8N9T2 125 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 OR4D5Q8NGN0 318 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 ELSPBP1Q96BH3 223 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 MCRIP2Q9BUT9 160 aaKnown RBP4.76□□□□□ -1.65
USF3-202ENST00000478658 DOCK2Q92608 1830 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 SYNGR1O43759 233 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 PRSS23O95084 383 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 GATA2P23769 480 aaPredicted RBP4.76□□□□□ -1.65
USF3-202ENST00000478658 ECSCRQ19T08 205 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 MRM1Q6IN84 353 aaKnown RBP4.76□□□□□ -1.65
USF3-202ENST00000478658 ARL6IP6Q8N6S5 226 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 C17orf77Q96MU5 243 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 SF3B5Q9BWJ5 86 aaKnown RBP4.76□□□□□ -1.65
USF3-202ENST00000478658 CDCA4Q9BXL8 241 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 GPR84Q9NQS5 396 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 KLHDC2Q9Y2U9 406 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 YPEL1O60688 119 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 SLC2A10O95528 541 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 CCL3P10147 92 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 SSBP2P81877 361 aaPredicted RBP4.76□□□□□ -1.65
USF3-202ENST00000478658 SS18Q15532 418 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 PMS2CLQ68D20 193 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 APOBEC3HQ6NTF7 200 aaKnown RBP4.76□□□□□ -1.65
USF3-202ENST00000478658 PRNTQ86SH4 94 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 PRR7Q8TB68 274 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 MS4A4AQ96JQ5 239 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 Q96M85 177 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 UBL5Q9BZL1 73 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 DSPPQ9NZW4 1301 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 MAST2Q6P0Q8 1798 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 SSC5DA1L4H1 1573 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 C3orf85A0A1B0GTC6 90 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 FAM90A26D6RGX4 464 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 TMPRSS2O15393 492 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 CD68P34810 354 aaPredicted RBP4.76□□□□□ -1.65
USF3-202ENST00000478658 TSPO2Q5TGU0 170 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 UNQ5815/PRO19632Q6UWF5 114 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 DSCR8Q96T75 97 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 NTN4Q9HB63 628 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 PARP11Q9NR21 331 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 NDUFA12Q9UI09 145 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 UCP1P25874 307 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 PPICP45877 212 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 MP68P56378 58 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 FOXK2Q01167 660 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 PSG5Q15238 335 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 FMC1Q96HJ9 113 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 NPVFQ9HCQ7 196 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 OTORQ9NRC9 128 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 TCRBV7S2A1N4TA0A589 114 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 TAPBPO15533 448 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 PRR35P0CG20 571 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 IL17AQ16552 155 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 Q5PR19 223 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 GOLT1AQ6ZVE7 132 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 CCL17Q92583 94 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 PLEKHB2Q96CS7 222 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 RNF167Q9H6Y7 350 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 BCL9LQ86UU0 1499 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 HPRT1P00492 218 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 GDF5P43026 501 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 C9orf135Q5VTT2 229 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 OR10D3Q8NH80 312 aa4.76□□□□□ -1.65
USF3-202ENST00000478658 TAF15Q92804 592 aaKnown RBP eCLIP4.76□□□□□ -1.65
USF3-202ENST00000478658 PITX3O75364 302 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 TBR1Q16650 682 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 TMEM170BQ5T4T1 132 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 MIC13Q5XKP0 118 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 C11orf87Q6NUJ2 197 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 SLC37A2Q8TED4 501 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 IGFBPL1Q8WX77 278 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 ASCL2Q99929 193 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 NALCNQ8IZF0 1738 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 KRBA1A5PL33 1030 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 GDF9O60383 454 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 CTSVO60911 334 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 IGKV5-2P06315 115 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 HBBP68871 147 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 MMDQ15546 238 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 SPATA45Q537H7 98 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 FAM78BQ5VT40 261 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 OR52E5Q8NH55 327 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 SCMH1Q96GD3 660 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 ZNF840PA6NDX5 716 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 HMSDA8MTL9 139 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 A8MWV9 139 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 C9JQL5 133 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 ZNF252P-AS1Q0IIN9 211 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 CBLL1Q75N03 491 aa4.75□□□□□ -1.65
USF3-202ENST00000478658 OR5P3Q8WZ94 311 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms