RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 HTD2P86397 168 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 MMDQ15546 238 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 BEAN1Q3B7T3 259 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 C2orf76Q3KRA6 126 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 MOGAT2Q3SYC2 334 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 RPL39P5Q59GN2 51 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 GLDNQ6ZMI3 551 aaPredicted RBP6.54□□□□□ -1.36
ERCC8-205ENST00000477893 FOXRED2Q8IWF2 684 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 STPG2Q8N412 459 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 Q8N6K4 173 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 Q8N9W7 124 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 KLHL30-AS1Q8NEE0 82 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 CHPT1Q8WUD6 406 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 MAFIPQ8WZ33 124 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 ABHD14BQ96IU4 210 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 RITA1Q96K30 269 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 DUX3Q96PT4 197 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 S1PR3Q99500 378 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 CMSS1Q9BQ75 279 aaKnown RBP6.54□□□□□ -1.36
ERCC8-205ENST00000477893 HSPB9Q9BQS6 159 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 PECRQ9BY49 303 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 IFI27L2Q9H2X8 130 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 C12orf4Q9NQ89 552 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 RNF150Q9ULK6 438 aa6.54□□□□□ -1.36
ERCC8-205ENST00000477893 LANCL1O43813 399 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 YPEL1O60688 119 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 SCTP09683 121 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 CD3GP09693 182 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 GNB3P16520 340 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 RAB3BP20337 219 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 CEACAM6P40199 344 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 ZNF137PP52743 207 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 ACTBP60709 375 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 RPL23AP62750 156 aaKnown RBP6.53□□□□□ -1.36
ERCC8-205ENST00000477893 EBI3Q14213 229 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 Q3ZCU0 254 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 PLAC9Q5JTB6 97 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 MOB1BQ7L9L4 216 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 ODF3L1Q8IXM7 274 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 SPARTQ8N0X7 666 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 OR56B1Q8NGI3 324 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 PHF21AQ96BD5 680 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 YPEL2Q96QA6 119 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 NABP2Q9BQ15 211 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 PARP11Q9NR21 331 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 PLSCR3Q9NRY6 295 aa6.53□□□□□ -1.36
ERCC8-205ENST00000477893 LIN7CQ9NUP9 197 aaKnown RBP6.53□□□□□ -1.36
ERCC8-205ENST00000477893 ZNF107Q9UII5 783 aaPredicted RBP6.53□□□□□ -1.36
ERCC8-205ENST00000477893 LOC100506127A0A0U1RQW1 187 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 TRDV1A0A1B0GX56 115 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 IFITM5A6NNB3 132 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 FOXI3A8MTJ6 420 aaPredicted RBP6.52□□□□□ -1.37
ERCC8-205ENST00000477893 H7C2Y5 167 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 AP4M1O00189 453 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 BET1O15155 118 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 IGHG2P01859 326 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 RPLP1P05386 114 aaKnown RBP6.52□□□□□ -1.37
ERCC8-205ENST00000477893 VDAC1P21796 283 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 SOX6P35712 828 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 TMEM50BP56557 158 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 PLGLAQ15195 96 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 NEDD8Q15843 81 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 DEFB136Q30KP8 78 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 STEAP3Q658P3 488 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 ZNF880Q6PDB4 577 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 ZNF833PQ6ZTB9 187 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 ZNF554Q86TJ5 538 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 FAM71E2Q8N5Q1 922 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 DRAXINQ8NBI3 349 aaPredicted RBP6.52□□□□□ -1.37
ERCC8-205ENST00000477893 ABHD5Q8WTS1 349 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 RAB3CQ96E17 227 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 ZNF251Q9BRH9 671 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 ATG5Q9H1Y0 275 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 ABCG5Q9H222 651 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 Q9N2K0 584 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 ZNF230Q9UIE0 474 aaPredicted RBP6.52□□□□□ -1.37
ERCC8-205ENST00000477893 RAB22AQ9UL26 194 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 WSB1Q9Y6I7 421 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 A3GALT2U3KPV4 340 aa6.52□□□□□ -1.37
ERCC8-205ENST00000477893 TRAV1-2A0A0B4J238 106 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 IGKV1-6A0A0C4DH72 117 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 J3QRK9 145 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 RAB29O14966 203 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 LDLRAD4O15165 306 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 NBR2O15453 112 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 RRP9O43818 475 aaKnown RBP6.51□□□□□ -1.37
ERCC8-205ENST00000477893 CD37P11049 281 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 ZBTB25P24278 435 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 GADD45AP24522 165 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 HOXD3P31249 432 aaPredicted RBP6.51□□□□□ -1.37
ERCC8-205ENST00000477893 PSMD7P51665 324 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 LINC00205P59089 165 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 MXD1Q05195 221 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 ARFRP1Q13795 201 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 ECSCRQ19T08 205 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 CXorf66Q5JRM2 361 aaPredicted RBP6.51□□□□□ -1.37
ERCC8-205ENST00000477893 UBE2UQ5VVX9 321 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 FOXB2Q5VYV0 432 aa6.51□□□□□ -1.37
ERCC8-205ENST00000477893 TEX38Q6PEX7 206 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms