RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LINC00614P0C842 121 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 WNT5AP41221 380 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 UBE2NP61088 152 aaKnown RBP11.63□□□□□ -0.55
PTPRE-204ENST00000455661 RANP62826 216 aaKnown RBP11.63□□□□□ -0.55
PTPRE-204ENST00000455661 RIPPLY2Q5TAB7 128 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 MRPL21Q7Z2W9 205 aaKnown RBP11.63□□□□□ -0.55
PTPRE-204ENST00000455661 RDH5Q92781 318 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 MIEN1Q9BRT3 115 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 GPR35Q9HC97 309 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 VCANP13611 3396 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 MLNRO43193 412 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 CCNOP22674 350 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 GCH1P30793 250 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 TPPP2P59282 170 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 PAFAH1B2P68402 229 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 FOXL1Q12952 345 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 TOMM20LQ6UXN7 152 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 SDSLQ96GA7 329 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 PLA2G3Q9NZ20 509 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 OR1A1Q9P1Q5 309 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 ZNF716A6NP11 495 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 PDE6DO43924 150 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 TNFSF13O75888 250 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 SOX8P57073 446 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 PMP22Q01453 160 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 ZNF585BQ52M93 769 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 TMEM144Q7Z5S9 345 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 LINC01551Q86U37 167 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 SLC25A45Q8N413 288 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 CADM4Q8NFZ8 388 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 SGCZQ96LD1 299 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 FGF23Q9GZV9 251 aaPredicted RBP11.62□□□□□ -0.55
PTPRE-204ENST00000455661 TMEM106BQ9NUM4 274 aa11.62□□□□□ -0.55
PTPRE-204ENST00000455661 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 C1QTNF9BB2RNN3 333 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 NPIPB11E5RHQ5 1161 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 C17orf112F2Z3M2 114 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 CELA2AP08217 269 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 SSR4P51571 173 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 TMEM183BQ1AE95 376 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 COLCA1Q6ZS62 124 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 CPEB3Q8NE35 698 aaKnown RBP11.61□□□□□ -0.55
PTPRE-204ENST00000455661 OR10P1Q8NGE3 313 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 PROK2Q9HC23 129 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 A6NNC1 897 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.61□□□□□ -0.55
PTPRE-204ENST00000455661 TMPRSS2O15393 492 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 SYNGR1O43759 233 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 IGLV2-14P01704 120 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 MPLP40238 635 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 PCOLCEQ15113 449 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 MSMO1Q15800 293 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 NUFIP2Q7Z417 695 aaKnown RBP11.61□□□□□ -0.55
PTPRE-204ENST00000455661 OR5A2Q8NGI9 324 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 KCNE4Q8WWG9 221 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 KIAA1549Q9HCM3 1950 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 SZT2Q5T011 3432 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 MYO9BQ13459 2157 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 ABCA7Q8IZY2 2146 aa11.61□□□□□ -0.55
PTPRE-204ENST00000455661 TRAV24A0A0B4J272 114 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 CXCL13O43927 109 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 NUPR1O60356 82 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 WDR1O75083 606 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 SYNGR4O95473 234 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 CYC1P08574 325 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 NPSP0C0P6 89 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 IRF2P14316 349 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 PRR18Q8N4B5 295 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 SGMS2Q8NHU3 365 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 A0A1B0GUS0 222 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 MDFIC2A0A1B0GVS7 189 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 SERPINA7P05543 415 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 NPPCP23582 126 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 ADMP35318 185 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 CDC34P49427 236 aaPredicted RBP11.6□□□□□ -0.55
PTPRE-204ENST00000455661 NPCDR1Q9BY65 106 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 PCED1AQ9H1Q7 454 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 OR51B6Q9H340 312 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 UBE2ZQ9H832 354 aaPredicted RBP11.6□□□□□ -0.55
PTPRE-204ENST00000455661 ZDHHC11Q9H8X9 412 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 DLL3Q9NYJ7 618 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 ELOVL5Q9NYP7 299 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 HSPB7Q9UBY9 170 aa11.6□□□□□ -0.55
PTPRE-204ENST00000455661 A0A1W2PR80 420 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 F6UZH7 168 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 PLA2G5P39877 138 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 ARSJQ5FYB0 599 aaPredicted RBP11.59□□□□□ -0.55
PTPRE-204ENST00000455661 FBXO46Q6PJ61 603 aaPredicted RBP11.59□□□□□ -0.55
PTPRE-204ENST00000455661 TEX43Q6ZNM6 134 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 MOB1BQ7L9L4 216 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 YRDCQ86U90 279 aaKnown RBP11.59□□□□□ -0.55
PTPRE-204ENST00000455661 FAM58AQ8N1B3 248 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 VAMP8Q9BV40 100 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 PATZ1Q9HBE1 687 aaKnown RBP11.59□□□□□ -0.55
PTPRE-204ENST00000455661 KRASP01116 189 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 KITLGP21583 273 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 BRS3P32247 399 aa11.59□□□□□ -0.55
PTPRE-204ENST00000455661 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms