RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	C1orf123	Q9NWV4	160 aa		5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	TAS2R4	Q9NYW5	299 aa		5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	SCP2D1	Q9UJQ7	156 aa		5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	FOXA2	Q9Y261	457 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	POLDIP2	Q9Y2S7	368 aa		5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	DSCAM	O60469	2012 aa		5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	CAD	P27708	2225 aa		5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RAI1	Q7Z5J4	1906 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	CFAP46	Q8IYW2	2715 aa		5.17	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638		A0A1W2PPK0	400 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	LRP5L	A4QPB2	252 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	FAM90A8P	A6NJQ4	464 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	PPIAL4D	F5H284	164 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	GABRP	O00591	440 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	PPIH	O43447	177 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	ZNF780A	O75290	641 aa	Predicted RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	NCR1	O76036	304 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	LY6H	O94772	140 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RGS11	O94810	467 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	MT-CO2	P00403	227 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	IFNA17	P01571	189 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	FAM90A13P	P0C7W8	464 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	FAM90A24P	P0C7X0	464 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	MAL	P21145	153 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	MYL9	P24844	172 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	COL8A2	P25067	703 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	S100G	P29377	79 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	CRYBB2	P43320	205 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	GPR6	P46095	362 aa	Predicted RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	MTCP1	P56278	107 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	UBE2K	P61086	200 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RAP2B	P61225	183 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RAN	P62826	216 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	ZNF154	Q13106	437 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	UBE2V2	Q15819	145 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	VWC2	Q2TAL6	325 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	TIMM50	Q3ZCQ8	353 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	SLC22A6	Q4U2R8	563 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	DMRTC1	Q5HYR2	192 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	C6orf226	Q5I0X4	101 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	ATAD3C	Q5T2N8	411 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	SAMD13	Q5VXD3	122 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	HAGHL	Q6PII5	290 aa	Predicted RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	TCF24	Q7RTU0	167 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	MKX	Q8IYA7	352 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	STPG2	Q8N412	459 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	C9orf62	Q8N4C0	152 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	EIF4E3	Q8N5X7	224 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	ZNF525	Q8N782	197 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	BOLL	Q8N9W6	283 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	PNLDC1	Q8NA58	520 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	DMBX1	Q8NFW5	382 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	ZNF420	Q8TAQ5	688 aa	Predicted RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	NUDCD2	Q8WVJ2	157 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	HPSE2	Q8WWQ2	592 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RGP1	Q92546	391 aa	Predicted RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RPL3L	Q92901	407 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	DERL3	Q96Q80	235 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	OR5B12	Q96R08	314 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	S100A13	Q99584	98 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	MEGF9	Q9H1U4	602 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	NOX4	Q9NPH5	578 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RNF7	Q9UBF6	113 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	STUB1	Q9UNE7	303 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	FOXJ3	Q9UPW0	622 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	HSPB11	Q9Y547	144 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	MYO18B	Q8IUG5	2567 aa		5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	ANKHD1	Q8IWZ3	2542 aa	Known RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	UBR5	O95071	2799 aa	Predicted RBP	5.16	□□□□□ -1.58
ECHDC1-208	ENST00000436638	RTTN	Q86VV8	2226 aa		5.15	□□□□□ -1.58
ECHDC1-208	ENST00000436638	PPIAL4E	A0A075B759	164 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TRBV5-7	A0A0A0MS05	114 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TRDV1	A0A1B0GX56	115 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PSMB11	A5LHX3	300 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LYNX1	G3V0Z9	82 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CLDN34	H7C241	214 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638		J3QT63	122 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PDCD5	O14737	125 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CNIH1	O95406	144 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MAS1	P04201	325 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ALDOB	P05062	364 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR8U8	P0C7N1	319 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SMIM18	P0DKX4	95 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PPIAL4F	P0DN26	164 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TMEM225B	P0DP42	221 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LYNX1	P0DP58	116 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SLC25A16	P16260	332 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GZMH	P20718	246 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RAB5B	P61020	215 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RPS11	P62280	158 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FABP5	Q01469	135 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	HNRNPA0	Q13151	305 aa	Known RBP	5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SSX1	Q16384	188 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MRPL23	Q16540	153 aa	Known RBP	5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ZNF181	Q2M3W8	571 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PDZD11	Q5EBL8	140 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GLT8D1	Q68CQ7	371 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TMEM200B	Q69YZ2	307 aa		5.15	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ATRAID	Q6UW56	229 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms