RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 NECAP2Q9NVZ3 263 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 KIAA1456Q9P272 454 aa13.86□□□□□ -0.19
NUP50-208ENST00000430547 ZNF107Q9UII5 783 aaPredicted RBP13.86□□□□□ -0.19
NUP50-208ENST00000430547 IFITM5A6NNB3 132 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 FOXI3A8MTJ6 420 aaPredicted RBP13.85□□□□□ -0.19
NUP50-208ENST00000430547 DUS4LO95620 317 aaKnown RBP13.85□□□□□ -0.19
NUP50-208ENST00000430547 PRB2P02812 416 aaPredicted RBP13.85□□□□□ -0.19
NUP50-208ENST00000430547 CD3GP09693 182 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 GALP22466 123 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 CEACAM6P40199 344 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 TMEM50BP56557 158 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 OR10A3P58181 314 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 CXorf66Q5JRM2 361 aaPredicted RBP13.85□□□□□ -0.19
NUP50-208ENST00000430547 C22orf42Q6IC83 251 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 CD200R1LQ6Q8B3 271 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 FCGR1BQ92637 280 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 RAB3CQ96E17 227 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 RBMXL1Q96E39 390 aaKnown RBP13.85□□□□□ -0.19
NUP50-208ENST00000430547 HSPB9Q9BQS6 159 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 Q9N2K0 584 aa13.85□□□□□ -0.19
NUP50-208ENST00000430547 LDLRAD4O15165 306 aa13.84□□□□□ -0.19
NUP50-208ENST00000430547 NBR2O15453 112 aa13.84□□□□□ -0.19
NUP50-208ENST00000430547 UBE2UQ5VVX9 321 aa13.84□□□□□ -0.19
NUP50-208ENST00000430547 C8orf86Q6ZUL3 223 aa13.84□□□□□ -0.19
NUP50-208ENST00000430547 OR1A1Q9P1Q5 309 aa13.84□□□□□ -0.19
NUP50-208ENST00000430547 METTL21EPA6NDL7 271 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 OR5H14A6NHG9 310 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 ITGB1BP1O14713 200 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 SCTP09683 121 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 OR5H8P0DN80 308 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 RPL39P5Q59GN2 51 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 PLAC9Q5JTB6 97 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 FOXB2Q5VYV0 432 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 FAM131AQ6UXB0 335 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 ZNF695Q8IW36 515 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 SPARTQ8N0X7 666 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 ABHD14BQ96IU4 210 aa13.83□□□□□ -0.2
NUP50-208ENST00000430547 YTHDF1Q9BYJ9 559 aaKnown RBP13.83□□□□□ -0.2
NUP50-208ENST00000430547 A0A075B6Q4 140 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 SHISA3A0PJX4 238 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 TRDCB7Z8K6 153 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 H7C2Y5 167 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 ELANEP08246 267 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 RAB6AP20340 208 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 CNTFRP26992 372 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 MC5RP33032 325 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 THBS3P49746 956 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 PLA2G7Q13093 441 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 FOXE3Q13461 319 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 PLGLAQ15195 96 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 OR10R2Q8NGX6 335 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 MRAPQ8TCY5 172 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 DPF1Q92782 380 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 GPR61Q9BZJ8 451 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 PARP12Q9H0J9 701 aaKnown RBP13.82□□□□□ -0.2
NUP50-208ENST00000430547 C11orf54Q9H0W9 315 aaPredicted RBP13.82□□□□□ -0.2
NUP50-208ENST00000430547 ZNF221Q9UK13 617 aa13.82□□□□□ -0.2
NUP50-208ENST00000430547 PRKDCP78527 4128 aaKnown RBP13.81□□□□□ -0.2
NUP50-208ENST00000430547 HLA-DRB1P01911 266 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 IGF1P05019 195 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 RPLP1P05386 114 aaKnown RBP13.81□□□□□ -0.2
NUP50-208ENST00000430547 GSTP1P09211 210 aaKnown RBP13.81□□□□□ -0.2
NUP50-208ENST00000430547 MYCNOSP40205 109 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 SERPINB10P48595 397 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 KIR2DS1Q14954 304 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 C5orf64Q2M2E5 130 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 LIN54Q6MZP7 749 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 ETV3LQ6ZN32 361 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 C18orf65Q6ZTR6 163 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 MRPL41Q8IXM3 137 aaKnown RBP13.81□□□□□ -0.2
NUP50-208ENST00000430547 OR4A4PQ8NGN8 299 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 CHCHD6Q9BRQ6 235 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 PARP11Q9NR21 331 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 ZNF580Q9UK33 172 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 STUB1Q9UNE7 303 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 SSR3Q9UNL2 185 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 WASHC3Q9Y3C0 194 aa13.81□□□□□ -0.2
NUP50-208ENST00000430547 SMIM30A4D0T7 59 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 FCGR3AP08637 254 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 CT45A6P0DMU7 189 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 CT45A5P0DMU8 189 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 CT45A7P0DMV0 189 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 GNB3P16520 340 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 FGF9P31371 208 aaPredicted RBP13.8□□□□□ -0.2
NUP50-208ENST00000430547 TALDO1P37837 337 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 ARFRP1Q13795 201 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 MOGAT2Q3SYC2 334 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 GLDNQ6ZMI3 551 aaPredicted RBP13.8□□□□□ -0.2
NUP50-208ENST00000430547 LCNL1Q6ZST4 164 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 NPBQ8NG41 125 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 PTX4Q96A99 478 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 RITA1Q96K30 269 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 KCTD7Q96MP8 289 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 AGMATQ9BSE5 352 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 MCRIP2Q9BUT9 160 aaKnown RBP13.8□□□□□ -0.2
NUP50-208ENST00000430547 ATG5Q9H1Y0 275 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 OR51J1Q9H342 316 aa13.8□□□□□ -0.2
NUP50-208ENST00000430547 AURKAIP1Q9NWT8 199 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms