RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 OR1A1Q9P1Q5 309 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 AK3Q9UIJ7 227 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 ZNF580Q9UK33 172 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 NBR2O15453 112 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 RRP9O43818 475 aaKnown RBP13.28□□□□□ -0.28
CPSF4-203ENST00000430038 NDUFA3O95167 84 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 HLA-DRB1P01911 266 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 UBBP0CG47 229 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 EGR2P11161 476 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-203ENST00000430038 GNB1P62873 340 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 DGCR2P98153 550 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 P2RY14Q15391 338 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 MED22Q15528 200 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 HSD17B12Q53GQ0 312 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 GLT8D1Q68CQ7 371 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 FAM89BQ8N5H3 189 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 OR11H1Q8NG94 326 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 KCNG3Q8TAE7 436 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 ABHD14BQ96IU4 210 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 OR5B12Q96R08 314 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 GPR61Q9BZJ8 451 aa13.28□□□□□ -0.28
CPSF4-203ENST00000430038 ALX4Q9H161 411 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-203ENST00000430038 CD69Q07108 199 aa13.27□□□□□ -0.29
CPSF4-203ENST00000430038 FAM131AQ6UXB0 335 aa13.27□□□□□ -0.29
CPSF4-203ENST00000430038 MINDY2Q8NBR6 621 aa13.27□□□□□ -0.29
CPSF4-203ENST00000430038 THRSPQ92748 146 aa13.27□□□□□ -0.29
CPSF4-203ENST00000430038 DPF1Q92782 380 aa13.27□□□□□ -0.29
CPSF4-203ENST00000430038 DUSP21Q9H596 190 aa13.27□□□□□ -0.29
CPSF4-203ENST00000430038 PARP11Q9NR21 331 aa13.27□□□□□ -0.29
CPSF4-203ENST00000430038 GAB2Q9UQC2 676 aa13.27□□□□□ -0.29
CPSF4-203ENST00000430038 AK6Q9Y3D8 172 aaKnown RBP13.27□□□□□ -0.29
CPSF4-203ENST00000430038 IGKV1-6A0A0C4DH72 117 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 SEC14L6B5MCN3 397 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 SCTP09683 121 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 CLDN12P56749 244 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 TPBGQ13641 420 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 LIN54Q6MZP7 749 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 OR2AK2Q8NG84 335 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 OR5M8Q8NGP6 311 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 SETD6Q8TBK2 473 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 UBE2E2Q96LR5 201 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 FBXL15Q9H469 300 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 PLEKHJ1Q9NW61 149 aa13.26□□□□□ -0.29
CPSF4-203ENST00000430038 TRBV6-6A0A0A6YYG2 114 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 TRAV41A0A0B4J266 112 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 H0YJW9 148 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 BPNT1O95861 308 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 MAP2K4P45985 399 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 RAB9AP51151 201 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 CX3CL1P78423 397 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 PLAC9Q5JTB6 97 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 DRAXINQ8NBI3 349 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-203ENST00000430038 OR6M1Q8NGM8 313 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 C11orf54Q9H0W9 315 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-203ENST00000430038 TPSG1Q9NRR2 321 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 SLC23A1Q9UHI7 598 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 RNF150Q9ULK6 438 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 LRRC42Q9Y546 428 aa13.25□□□□□ -0.29
CPSF4-203ENST00000430038 SHISA3A0PJX4 238 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 SLC17A2O00624 439 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 RGS11O94810 467 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 ECI1P42126 302 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 RUNX1Q01196 453 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 FABP5Q01469 135 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 ZNF260Q3ZCT1 412 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 C9orf66Q5T8R8 295 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 OR5AN1Q8NGI8 311 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 OR1N2Q8NGR9 330 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 ARHGAP5-AS1Q96IT6 56 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 CHMP1AQ9HD42 196 aaPredicted RBP13.24□□□□□ -0.29
CPSF4-203ENST00000430038 Q9N2K0 584 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 ABRACLQ9P1F3 81 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 KCNK7Q9Y2U2 307 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 NUBP2Q9Y5Y2 271 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 STAB2Q8WWQ8 2551 aa13.24□□□□□ -0.29
CPSF4-203ENST00000430038 RRHO14718 337 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 RAB29O14966 203 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 LDLRAD4O15165 306 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 RAMP3O60896 148 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 CD3GP09693 182 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 HSMCR30P0CW71 290 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 CEACAM6P40199 344 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 VEGFCP49767 419 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 DCUN1D4Q92564 292 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 UFD1Q92890 307 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 CHCHD6Q9BRQ6 235 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 FAM103A1Q9BTL3 118 aaKnown RBP13.23□□□□□ -0.29
CPSF4-203ENST00000430038 PECRQ9BY49 303 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 PIPOXQ9P0Z9 390 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 STEAP1Q9UHE8 339 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 VSIG4Q9Y279 399 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 TNCP24821 2201 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
CPSF4-203ENST00000430038 IGKV1-16P04430 117 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 OR5H8P0DN80 308 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 ARSBP15848 533 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 CPEP16870 476 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-203ENST00000430038 HLA-DRB3P79483 266 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms