RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 DCHS2Q6V1P9 2916 aa12.56□□□□□ -0.4
ACTB-204ENST00000425660 A0A0D9SG52 128 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 NDUFB3O43676 98 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 NDUFB7P17568 137 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 OMGP23515 440 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 LRRC10Q5BKY1 277 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 TEX261Q6UWH6 196 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 ACOT7LQ6ZUV0 252 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 KCNRGQ8N5I3 272 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 NEU4Q8WWR8 484 aaPredicted RBP12.55□□□□□ -0.4
ACTB-204ENST00000425660 PLEKHF2Q9H8W4 249 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 FAM212BQ9NTI7 297 aaPredicted RBP12.55□□□□□ -0.4
ACTB-204ENST00000425660 GFOD1Q9NXC2 390 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 RNF150Q9ULK6 438 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 U3KQ87 197 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 DOPEY1Q5JWR5 2465 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 A6NNC1 897 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 TSC22D2O75157 780 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 GOSR1O95249 250 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 IGHV2-70P01814 119 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 SERPINE2P07093 398 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
ACTB-204ENST00000425660 ZNF585BQ52M93 769 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 OR10A7Q8NGE5 316 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 ARL6Q9H0F7 186 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 C19orf12Q9NSK7 152 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 PSG11Q9UQ72 335 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 GAB2Q9UQC2 676 aa12.55□□□□□ -0.4
ACTB-204ENST00000425660 DVL1O14640 695 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 ST8SIA5O15466 376 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 ZNF134P52741 427 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 LTC4SQ16873 150 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 ZNF66Q6ZN08 573 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 TCTEX1D1Q8N7M0 179 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 OR4D5Q8NGN0 318 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 SPIN2AQ99865 258 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 SPIN2BQ9BPZ2 258 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 IFI27L2Q9H2X8 130 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 GAL3ST2Q9H3Q3 398 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 IDI2-AS1Q9NZ38 188 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 OR5AC2Q9NZP5 309 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 FLNCQ14315 2725 aa12.54□□□□□ -0.4
ACTB-204ENST00000425660 LYNX1G3V0Z9 82 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 PROP1O75360 226 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 DEDDO75618 318 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 IGKV1-39P01597 117 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 IGKV1D-39P04432 117 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 LYNX1P0DP58 116 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 SLC25A6P12236 298 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 RAB7AP51149 207 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 ZNF273Q14593 569 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 INO80EQ8NBZ0 244 aaPredicted RBP12.53□□□□□ -0.4
ACTB-204ENST00000425660 ZNF439Q8NDP4 499 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 DCUN1D4Q92564 292 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 ABHD14BQ96IU4 210 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 HSD17B10Q99714 261 aaKnown RBP12.53□□□□□ -0.4
ACTB-204ENST00000425660 RPUSD1Q9UJJ7 312 aaKnown RBP12.53□□□□□ -0.4
ACTB-204ENST00000425660 MBPP02686 304 aaPredicted RBP12.53□□□□□ -0.4
ACTB-204ENST00000425660 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
ACTB-204ENST00000425660 CATR1Q13166 79 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 TMEM200BQ69YZ2 307 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 HEPN1Q6WQI6 88 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 ZNF680Q8NEM1 530 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 OR1S1Q8NH92 325 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 LSM10Q969L4 123 aaKnown RBP12.53□□□□□ -0.4
ACTB-204ENST00000425660 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
ACTB-204ENST00000425660 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 LAMP3Q9UQV4 416 aa12.53□□□□□ -0.4
ACTB-204ENST00000425660 BRWD1-AS2P59051 145 aa12.52□□□□□ -0.41
ACTB-204ENST00000425660 S100A10P60903 97 aa12.52□□□□□ -0.41
ACTB-204ENST00000425660 CT45A1Q5HYN5 189 aa12.52□□□□□ -0.41
ACTB-204ENST00000425660 OR8H1Q8NGG4 311 aa12.52□□□□□ -0.41
ACTB-204ENST00000425660 CT45A3Q8NHU0 189 aa12.52□□□□□ -0.41
ACTB-204ENST00000425660 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
ACTB-204ENST00000425660 ABHD14AQ9BUJ0 271 aa12.52□□□□□ -0.41
ACTB-204ENST00000425660 KLF2Q9Y5W3 355 aaPredicted RBP12.52□□□□□ -0.41
ACTB-204ENST00000425660 TRBV23-1A0A0A0MS06 115 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 K7EPK0 472 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 GPR37O15354 613 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 MMP23AO75900 390 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 RLN2P04090 185 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 GPR12P47775 334 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
ACTB-204ENST00000425660 UTF1Q5T230 341 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 ZNF841Q6ZN19 808 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 FAM219AQ8IW50 185 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 FAM71E2Q8N5Q1 922 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.51□□□□□ -0.41
ACTB-204ENST00000425660 USP9XQ93008 2570 aaPredicted RBP12.51□□□□□ -0.41
ACTB-204ENST00000425660 A0A1B0GU03 582 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 PITX3O75364 302 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 CLDN1O95832 211 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 DAOP14920 347 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 DUTP33316 252 aaKnown RBP12.51□□□□□ -0.41
ACTB-204ENST00000425660 SMCO1Q147U7 214 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms