RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 EXOSC4Q9NPD3 245 aaKnown RBP3.54□□□□□ -1.84
PTPRK-209ENST00000415046 ACOT13Q9NPJ3 140 aa3.54□□□□□ -1.84
PTPRK-209ENST00000415046 ONECUT1Q9UBC0 465 aa3.54□□□□□ -1.84
PTPRK-209ENST00000415046 ZNF222Q9UK12 451 aa3.54□□□□□ -1.84
PTPRK-209ENST00000415046 GSTK1Q9Y2Q3 226 aa3.54□□□□□ -1.84
PTPRK-209ENST00000415046 MRPS28Q9Y2Q9 187 aaKnown RBP3.54□□□□□ -1.84
PTPRK-209ENST00000415046 FBN1P35555 2871 aaKnown RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 TRAV40A0A0B4J280 105 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 IGHV2-70DA0A0C4DH43 119 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 A0A1W2PRD5 423 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 A0A1W2PRF3 423 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 A0A1W2PRM7 423 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 A8MXK9 166 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 SLC33A1O00400 549 aaPredicted RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 SIGLEC5O15389 551 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 ST8SIA3O43173 380 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 XRCC3O43542 346 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 NDUFA2O43678 99 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 ENSAO43768 121 aaKnown RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 B3GALNT1O75752 331 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 TNFAIP8O95379 198 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 HAND1O96004 215 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 SFTPBP07988 381 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 ZNF44P15621 663 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 IGFBP3P17936 291 aaPredicted RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 PCMT1P22061 227 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 ZNF93P35789 620 aaPredicted RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 CFHR2P36980 270 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 DLX1P56177 255 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 EDDM3BP56851 147 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 SNRPEP62304 92 aaKnown RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 ARF6P62330 175 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 FABP5Q01469 135 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 KLRD1Q13241 179 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 TPBGQ13641 420 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 ATXN7L3Q14CW9 347 aaPredicted RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 P2RY14Q15391 338 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 TRAM1Q15629 374 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 SSX1Q16384 188 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 DGUOKQ16854 277 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 PIGYQ3MUY2 71 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 KCTD21Q4G0X4 260 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 SLC22A6Q4U2R8 563 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 BTNL3Q6UXE8 466 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 BTN2A1Q7KYR7 527 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 GDPD3Q7L5L3 318 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 PHC2Q8IXK0 858 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 PDZD9Q8IXQ8 264 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 Q8IYB0 196 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 TPRX1Q8N7U7 411 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 UXS1Q8NBZ7 420 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 OR4M1Q8NGD0 313 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 C22orf15Q8WYQ4 148 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 THRSPQ92748 146 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 ST6GALNAC6Q969X2 333 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 C12orf43Q96C57 262 aaKnown RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 CPNE2Q96FN4 548 aaPredicted RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 SDSLQ96GA7 329 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 S100A13Q99584 98 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 DCTN5Q9BTE1 182 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 YTHDF1Q9BYJ9 559 aaKnown RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 SLITRK2Q9H156 845 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 PPA2Q9H2U2 334 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 PLGRKTQ9HBL7 147 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 HES4Q9HCC6 221 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 HMG20AQ9NP66 347 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 TMEM138Q9NPI0 162 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 C19orf12Q9NSK7 152 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 RASL12Q9NYN1 266 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 KAAG1Q9UBP8 84 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 RPUSD1Q9UJJ7 312 aaKnown RBP3.53□□□□□ -1.84
PTPRK-209ENST00000415046 RNF150Q9ULK6 438 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 LRRC42Q9Y546 428 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 MAB21L2Q9Y586 359 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 INSIG2Q9Y5U4 225 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 AUP1Q9Y679 476 aa3.53□□□□□ -1.84
PTPRK-209ENST00000415046 VWFP04275 2813 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 PPIAL4CA0A0B4J2A2 164 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 LOC100506127A0A0U1RQW1 187 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 KIR2DS1A0A191URI9 304 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 J3QLI3 93 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 CCRL2O00421 344 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 SH2D1BO14796 132 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 NOS1APO75052 506 aaPredicted RBP3.52□□□□□ -1.85
PTPRK-209ENST00000415046 CRTAPO75718 401 aaPredicted RBP3.52□□□□□ -1.85
PTPRK-209ENST00000415046 ARL6IP5O75915 188 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 FSTL3O95633 263 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 OR2H2O95918 312 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 RLN1P04808 185 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 LIPFP07098 398 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 UCHL1P09936 223 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 PPIAL4GP0DN37 164 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 IGHV4-38-2P0DP08 117 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 CCL3L1P16619 93 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 GADD45AP24522 165 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 PTGFRP43088 359 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 OR3A1P47881 315 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 CD81P60033 236 aa3.52□□□□□ -1.85
PTPRK-209ENST00000415046 RPL31P62899 125 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms