RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SPCS2Q15005 226 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 FBLN7Q53RD9 439 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 OR10J5Q8NHC4 309 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 PIPOXQ9P0Z9 390 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 SAA2-SAA4A0A096LPE2 208 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 RAB29O14966 203 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 SAA2P0DJI9 122 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 CD1BP29016 333 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 OR3A3P47888 321 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 EBI3Q14213 229 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 MZT2AQ6P582 158 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 ZNF833PQ6ZTB9 187 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 SLC25A33Q9BSK2 321 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 ZNF747Q9BV97 191 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 RDH8Q9NYR8 311 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 RNF114Q9Y508 228 aa15.87■□□□□ 0.13
PDLIM2-207ENST00000409417 IGKV1D-33P01593 117 aa15.86■□□□□ 0.13
PDLIM2-207ENST00000409417 IGKV1-33P01594 117 aa15.86■□□□□ 0.13
PDLIM2-207ENST00000409417 EIF4EP06730 217 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-207ENST00000409417 HES1Q14469 280 aa15.86■□□□□ 0.13
PDLIM2-207ENST00000409417 TMEM69Q5SWH9 247 aa15.86■□□□□ 0.13
PDLIM2-207ENST00000409417 FAM71F2Q6NXP2 309 aa15.86■□□□□ 0.13
PDLIM2-207ENST00000409417 Q8N2B8 174 aa15.86■□□□□ 0.13
PDLIM2-207ENST00000409417 ANK2Q01484 3957 aa15.86■□□□□ 0.13
PDLIM2-207ENST00000409417 IGHV3-72A0A0B4J1Y9 119 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 M0QZK8 103 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 NOL3O60936 208 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 CTXN2P0C2S0 81 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 SOX6P35712 828 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 OR2T6Q8NHC8 308 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 ABHD14BQ96IU4 210 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 S1PR3Q99500 378 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 ZNF251Q9BRH9 671 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 ZNF702PQ9H963 129 aa15.85■□□□□ 0.13
PDLIM2-207ENST00000409417 SMIM31A0A1B0GVY4 71 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 HPGDSO60760 199 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 PTHLHP12272 177 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 TMEM11P17152 192 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 PROK1P58294 105 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 TAS2R20P59543 309 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 BLCAPP62952 87 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 HNF4GQ14541 408 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 OR2T10Q8NGZ9 312 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 ISOC1Q96CN7 298 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 GINS4Q9BRT9 223 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 PRSS22Q9GZN4 317 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 ANXA10Q9UJ72 324 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 SIGLEC9Q9Y336 463 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 ZNF736B4DX44 427 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 H3BMQ9 156 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 ELK1P19419 428 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 CBX5P45973 191 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 LSAMPQ13449 338 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 RPL39P5Q59GN2 51 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 CNIH2Q6PI25 160 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 HOGA1Q86XE5 327 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 BEST4Q8NFU0 473 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 WFDC12Q8WWY7 111 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 EAF1Q96JC9 268 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 MRPL20Q9BYC9 149 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 ZNF221Q9UK13 617 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 RNF150Q9ULK6 438 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 MOB4Q9Y3A3 225 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 CEPT1Q9Y6K0 416 aa15.84■□□□□ 0.13
PDLIM2-207ENST00000409417 MOSP00540 346 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 AMY1AP04745 511 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 AMY2AP04746 511 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 C11orf88Q6PI97 169 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 SHISA2Q6UWI4 295 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 H1FOOQ8IZA3 346 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 Q8N6K4 173 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 GVQW1Q8N7I0 195 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 DYNC2LI1Q8TCX1 351 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 NABP2Q9BQ15 211 aa15.83■□□□□ 0.12
PDLIM2-207ENST00000409417 OR8U9P0C7N5 309 aa15.82■□□□□ 0.12
PDLIM2-207ENST00000409417 GPR12P47775 334 aa15.82■□□□□ 0.12
PDLIM2-207ENST00000409417 OR8U1Q8NH10 309 aa15.82■□□□□ 0.12
PDLIM2-207ENST00000409417 CCDC59Q9P031 241 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-207ENST00000409417 FGF16O43320 207 aa15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 HLA-DQB1P01920 261 aa15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 CT45A6P0DMU7 189 aa15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 CT45A5P0DMU8 189 aa15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 CT45A7P0DMV0 189 aa15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 PRSS3P35030 304 aa15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 ABCA11PQ4W5N1 156 aa15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 Q6ZS46 218 aa15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 MRPS7Q9Y2R9 242 aaKnown RBP15.81■□□□□ 0.12
PDLIM2-207ENST00000409417 FAM25AB3EWG3 89 aa15.8■□□□□ 0.12
PDLIM2-207ENST00000409417 FAM25CB3EWG5 89 aa15.8■□□□□ 0.12
PDLIM2-207ENST00000409417 FAM25GB3EWG6 89 aa15.8■□□□□ 0.12
PDLIM2-207ENST00000409417 HAX1O00165 279 aa15.8■□□□□ 0.12
PDLIM2-207ENST00000409417 PROP1O75360 226 aa15.8■□□□□ 0.12
PDLIM2-207ENST00000409417 OR8H1Q8NGG4 311 aa15.8■□□□□ 0.12
PDLIM2-207ENST00000409417 SERTAD4Q9NUC0 356 aa15.8■□□□□ 0.12
PDLIM2-207ENST00000409417 GAB2Q9UQC2 676 aa15.8■□□□□ 0.12
PDLIM2-207ENST00000409417 ARPC4P59998 168 aa15.79■□□□□ 0.12
PDLIM2-207ENST00000409417 C5orf56Q8N8D9 126 aa15.79■□□□□ 0.12
PDLIM2-207ENST00000409417 SNAPC3Q92966 411 aa15.79■□□□□ 0.12
PDLIM2-207ENST00000409417 OR2D2Q9H210 308 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms