RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CST4P01036 141 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 LINC00271P0C7V0 271 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 SMIM18P0DKX4 95 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 RAB5AP20339 215 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 DYNLT3P51808 116 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 BATFQ16520 125 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 TEPPQ6URK8 271 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 OVCH2Q7RTZ1 564 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 LINC01356Q8N9X3 169 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 SLC25A33Q9BSK2 321 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 ZNF426Q9BUY5 554 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 FAM206AQ9NX38 181 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 SEMA5BQ9P283 1151 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 WSB1Q9Y6I7 421 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 TMEM56-RWDD3S4R434 201 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 RALGAPA2Q2PPJ7 1873 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 B4DSR2 109 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 GLIPR1P48060 266 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 PSG5Q15238 335 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 DEFB121Q5J5C9 76 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 Q5PR19 223 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 TMEM78Q5T7P6 136 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 GTSCR1Q86UQ5 136 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 HOGA1Q86XE5 327 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A1Q86YD7 464 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 WDFY1Q8IWB7 410 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 OR2C3Q8N628 320 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 GPR61Q9BZJ8 451 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 TRPM6Q9BX84 2022 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 IGHV1-18A0A0C4DH31 117 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 LOC390937A0A1W2PQ73 354 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 GATCO43716 136 aaKnown RBP4.28□□□□□ -1.72
SCN3A-203ENST00000409101 S1PR2O95136 353 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 CELA3BP08861 270 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 FSTP19883 344 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 P2RY1P47900 373 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 TMEM50BP56557 158 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 MEF2CQ06413 473 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-203ENST00000409101 C11orf87Q6NUJ2 197 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 Q6ZS92 163 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 SLC16A13Q7RTY0 426 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 CRIM1Q9NZV1 1036 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 FBXL17Q9UF56 701 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 URGCP-MRPS24S4R325 110 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 SBF1O95248 1867 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 MAP1LC3B2A6NCE7 125 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 NPIPB13A6NJU9 1138 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 C17orf51A8MQB3 221 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 IQCF6A8MYZ5 107 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 NPIPB4C9JG80 1138 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 MOSP00540 346 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 FCER1GP30273 86 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 KIR2DL2P43627 348 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-203ENST00000409101 PSG9Q00887 426 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 KLF9Q13886 244 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-203ENST00000409101 TCTE3Q8IZS6 198 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 C5orf17Q8NAS9 161 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 FLVCR1-AS1Q8TAF5 88 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 LSM10Q969L4 123 aaKnown RBP4.28□□□□□ -1.72
SCN3A-203ENST00000409101 MAP1LC3BQ9GZQ8 125 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 ARID2Q68CP9 1835 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 ANKRD20A5PA0PJZ0 165 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 PPP5D1E7EU14 171 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 CD33P20138 364 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 NPPCP23582 126 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 SLC6A1P30531 599 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 POLR2GP62487 172 aaKnown RBP eCLIP4.28□□□□□ -1.72
SCN3A-203ENST00000409101 LRRC75BQ2VPJ9 315 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 C17orf82Q86X59 251 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-203ENST00000409101 FAM216BQ8N7L0 139 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 ZNRF1Q8ND25 227 aa4.28□□□□□ -1.72
SCN3A-203ENST00000409101 TRAV8-7A0A075B6U6 113 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 DUXBA0A1W2PPF3 345 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 HELTA6NFD8 242 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 ADAM10O14672 748 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 ZNF737O75373 536 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 ISG15P05161 165 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 CD1AP06126 327 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 CD37P11049 281 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 FOXF2Q12947 444 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 ANKRD55Q3KP44 614 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 LGALSLQ3ZCW2 172 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-203ENST00000409101 FAM201AQ5SY85 155 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 FAM78BQ5VT40 261 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 SLC35E4Q6ICL7 350 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 LINC00299Q6ZSB3 139 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 TCTEX1D1Q8N7M0 179 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 AQP3Q92482 292 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 FAM103A1Q9BTL3 118 aaKnown RBP4.27□□□□□ -1.73
SCN3A-203ENST00000409101 SLC2A9Q9NRM0 540 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 PLSCR4Q9NRQ2 329 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 MRPL22Q9NWU5 206 aaKnown RBP4.27□□□□□ -1.73
SCN3A-203ENST00000409101 TRAV40A0A0B4J280 105 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 IGSF23A1L1A6 192 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 RGS13O14921 159 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 RAMP1O60894 148 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 RD3LP0DJH9 198 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 RAB9AP51151 201 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 BAP18Q8IXM2 172 aa4.27□□□□□ -1.73
SCN3A-203ENST00000409101 ITLN2Q8WWU7 325 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms