RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 FAM216BQ8N7L0 139 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 C5orf30Q96GV9 206 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 YPEL2Q96QA6 119 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 PPIAL4EA0A075B759 164 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 PPIAL4DF5H284 164 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 ST8SIA5O15466 376 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 PPIAL4FP0DN26 164 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 CGB3P0DN86 165 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 CGB7P0DN87 165 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 EPHA1P21709 976 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 AKR1C2P52895 323 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 TMEM33P57088 247 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 POLR2GP62487 172 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP39-202ENST00000409025 ID3Q02535 119 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 MST1LQ2TV78 715 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 CXorf66Q5JRM2 361 aaPredicted RBP15.74■□□□□ 0.11
USP39-202ENST00000409025 CCL17Q92583 94 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 CXorf58Q96LI9 332 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 TMEM106BQ9NUM4 274 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 MED9Q9NWA0 146 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 FBXL17Q9UF56 701 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 PPIAL4AQ9Y536 164 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 A0A0G2JRQ6 117 aa15.73■□□□□ 0.11
USP39-202ENST00000409025 LPAR6P43657 344 aa15.73■□□□□ 0.11
USP39-202ENST00000409025 ZNF66Q6ZN08 573 aa15.73■□□□□ 0.11
USP39-202ENST00000409025 AGMATQ9BSE5 352 aa15.73■□□□□ 0.11
USP39-202ENST00000409025 SDHAF2Q9NX18 166 aa15.73■□□□□ 0.11
USP39-202ENST00000409025 PFDN2Q9UHV9 154 aa15.73■□□□□ 0.11
USP39-202ENST00000409025 ARID1AO14497 2285 aa15.73■□□□□ 0.11
USP39-202ENST00000409025 CACNA1AO00555 2505 aa15.73■□□□□ 0.11
USP39-202ENST00000409025 TMPRSS2O15393 492 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 LOXL3P58215 753 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 VAMP2P63027 116 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 C17orf58Q2M2W7 97 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 RPL7L1Q6DKI1 246 aaKnown RBP15.72■□□□□ 0.11
USP39-202ENST00000409025 BTNL3Q6UXE8 466 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 TCTEX1D1Q8N7M0 179 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 TCTEX1D2Q8WW35 142 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 C11orf1Q9H5F2 150 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 NCOR2Q9Y618 2525 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 KBTBD11-OT1A0A1B0GTJ5 212 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 WRBO00258 174 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 SSSCA1O60232 199 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 PITX3O75364 302 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 CLDN1O95832 211 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 IGKV1-5P01602 117 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 MMP9P14780 707 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 GPR12P47775 334 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 RPL30P62888 115 aaKnown RBP15.72■□□□□ 0.11
USP39-202ENST00000409025 HSD17B10Q99714 261 aaKnown RBP15.72■□□□□ 0.11
USP39-202ENST00000409025 MAGT1Q9H0U3 335 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 CLN8Q9UBY8 286 aa15.72■□□□□ 0.11
USP39-202ENST00000409025 SIAH2O43255 324 aa15.71■□□□□ 0.11
USP39-202ENST00000409025 JTBO76095 146 aa15.71■□□□□ 0.11
USP39-202ENST00000409025 GAPDHP04406 335 aaKnown RBP15.71■□□□□ 0.11
USP39-202ENST00000409025 OMGP23515 440 aa15.71■□□□□ 0.11
USP39-202ENST00000409025 Q3ZCU0 254 aa15.71■□□□□ 0.11
USP39-202ENST00000409025 OR2C3Q8N628 320 aa15.71■□□□□ 0.11
USP39-202ENST00000409025 SMIM3Q9BZL3 60 aa15.71■□□□□ 0.11
USP39-202ENST00000409025 FAM212BQ9NTI7 297 aaPredicted RBP15.71■□□□□ 0.11
USP39-202ENST00000409025 MED19A0JLT2 244 aaPredicted RBP15.7■□□□□ 0.1
USP39-202ENST00000409025 ZNF729A6NN14 1252 aaPredicted RBP15.7■□□□□ 0.1
USP39-202ENST00000409025 CLDN14O95500 239 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 NDUFB7P17568 137 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 ZNF672Q499Z4 452 aaPredicted RBP15.7■□□□□ 0.1
USP39-202ENST00000409025 LRRC20Q8TCA0 184 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 CORO2AQ92828 525 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 CACNG5Q9UF02 275 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 ATG12O94817 140 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 NXPH3O95157 252 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 SWI5Q1ZZU3 235 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 OR2B11Q5JQS5 317 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 EIF5AL1Q6IS14 154 aaKnown RBP15.7■□□□□ 0.1
USP39-202ENST00000409025 CLEC9AQ6UXN8 241 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 SPAG16Q8N0X2 631 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 MUC15Q8N387 334 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 FGFRL1Q8N441 504 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 TMED6Q8WW62 240 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 SLC25A31Q9H0C2 315 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 GFOD1Q9NXC2 390 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 SLC25A10Q9UBX3 287 aaPredicted RBP15.7■□□□□ 0.1
USP39-202ENST00000409025 TANC2Q9HCD6 1990 aa15.7■□□□□ 0.1
USP39-202ENST00000409025 hADV38S2A0JD32 116 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 ITGB1BP1O14713 200 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 RAMP3O60896 148 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 CAV2P51636 162 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 AANATQ16613 207 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 IZUMO4Q1ZYL8 232 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 Q6ZRM9 215 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 LYRM2Q9NU23 88 aaPredicted RBP15.69■□□□□ 0.1
USP39-202ENST00000409025 MMP24Q9Y5R2 645 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 DSCAML1Q8TD84 2053 aa15.69■□□□□ 0.1
USP39-202ENST00000409025 BORCS7-ASMTA0A0B4J1R7 106 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 IGHV1-69-2A0A0G2JMI3 117 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 FAM24AA6NFZ4 105 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 C17orf98A8MV24 154 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 CHST1O43916 411 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 RAB7AP51149 207 aa15.68■□□□□ 0.1
USP39-202ENST00000409025 EWSR1Q01844 656 aaKnown RBP eCLIP15.68■□□□□ 0.1
USP39-202ENST00000409025 NHLH2Q02577 135 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms