RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 C1orf196B1AJZ1 125 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 OR8U8P0C7N1 319 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 UBE2KP61086 200 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 RPL30P62888 115 aaKnown RBP14.11□□□□□ -0.15
NUP50-203ENST00000407019 HABP2Q14520 560 aaPredicted RBP14.11□□□□□ -0.15
NUP50-203ENST00000407019 P2RY6Q15077 328 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 MSMO1Q15800 293 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 SPANXN5Q5MJ07 72 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 FAM53AQ6NSI3 398 aaPredicted RBP14.11□□□□□ -0.15
NUP50-203ENST00000407019 IGF2-ASQ6U949 168 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 C1orf174Q8IYL3 243 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 STARD4Q96DR4 205 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 TAAR6Q96RI8 345 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 METRNQ9UJH8 293 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 OR5H1A6NKK0 313 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 RAMP3O60896 148 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 CGAP01215 116 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 RPL35P42766 123 aaKnown RBP14.11□□□□□ -0.15
NUP50-203ENST00000407019 TNFRSF9Q07011 255 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 MZT1Q08AG7 82 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 LRRC75BQ2VPJ9 315 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 OR2B11Q5JQS5 317 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 LURAP1Q96LR2 239 aa14.11□□□□□ -0.15
NUP50-203ENST00000407019 PPIHO43447 177 aaKnown RBP14.1□□□□□ -0.15
NUP50-203ENST00000407019 CEACAM4O75871 244 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 G6PCP35575 357 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 GLIPR1P48060 266 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 ZNF816Q0VGE8 651 aaPredicted RBP14.1□□□□□ -0.15
NUP50-203ENST00000407019 LRRC29Q8WV35 223 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 PARD6GQ9BYG4 376 aaPredicted RBP14.1□□□□□ -0.15
NUP50-203ENST00000407019 RBKSQ9H477 322 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 A0A1B0GWJ7 208 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 A0A1W2PPE2 198 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 H3BQ15 152 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 P0C879 139 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 CEBPGP53567 150 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 KHDC3LQ587J8 217 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 ZADH2Q8N4Q0 377 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 FAM169BQ8N8A8 192 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 OR13A1Q8NGR1 328 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 TCTEX1D2Q8WW35 142 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 RPRMQ9NS64 109 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 HSPB7Q9UBY9 170 aa14.1□□□□□ -0.15
NUP50-203ENST00000407019 MBD3L4A6NDZ8 208 aaPredicted RBP14.09□□□□□ -0.15
NUP50-203ENST00000407019 MBD3L3A6NE82 208 aaPredicted RBP14.09□□□□□ -0.15
NUP50-203ENST00000407019 MBD3L5A6NJ08 208 aaPredicted RBP14.09□□□□□ -0.15
NUP50-203ENST00000407019 S1PR2O95136 353 aa14.09□□□□□ -0.15
NUP50-203ENST00000407019 CLDN1O95832 211 aa14.09□□□□□ -0.15
NUP50-203ENST00000407019 KRASP01116 189 aa14.09□□□□□ -0.15
NUP50-203ENST00000407019 ARG1P05089 322 aa14.09□□□□□ -0.15
NUP50-203ENST00000407019 SSTR5P35346 364 aa14.09□□□□□ -0.15
NUP50-203ENST00000407019 BEND4Q6ZU67 534 aa14.09□□□□□ -0.15
NUP50-203ENST00000407019 TPRX1Q8N7U7 411 aa14.09□□□□□ -0.15
NUP50-203ENST00000407019 MBD3L2Q8NHZ7 208 aaPredicted RBP14.09□□□□□ -0.15
NUP50-203ENST00000407019 WDR61Q9GZS3 305 aaKnown RBP14.09□□□□□ -0.15
NUP50-203ENST00000407019 SLC25A15Q9Y619 301 aa14.09□□□□□ -0.15
NUP50-203ENST00000407019 LOC102723971A0A1B0GUV8 181 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 RAB5AP20339 215 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 SERF2P84101 59 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 SLC38A11Q08AI6 406 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 TRAT1Q6PIZ9 186 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 BTNL3Q6UXE8 466 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 TMEM14EPQ6UXP3 125 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 SEM1Q6ZVN7 128 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 ZNF561Q8N587 486 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 FAM24BQ8N5W8 94 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 CD177Q8N6Q3 437 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 TCTEX1D1Q8N7M0 179 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 CYB561D1Q8N8Q1 229 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 OR4C12Q96R67 309 aa14.08□□□□□ -0.15
NUP50-203ENST00000407019 ODAMA1E959 279 aa14.08□□□□□ -0.16
NUP50-203ENST00000407019 C17orf98A8MV24 154 aa14.08□□□□□ -0.16
NUP50-203ENST00000407019 IFNA4P05014 189 aa14.08□□□□□ -0.16
NUP50-203ENST00000407019 FBP1P09467 338 aa14.08□□□□□ -0.16
NUP50-203ENST00000407019 ZNF787Q6DD87 383 aa14.08□□□□□ -0.16
NUP50-203ENST00000407019 OR2Z1Q8NG97 314 aa14.08□□□□□ -0.16
NUP50-203ENST00000407019 VSIRQ9H7M9 311 aa14.08□□□□□ -0.16
NUP50-203ENST00000407019 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.08□□□□□ -0.16
NUP50-203ENST00000407019 GNG13Q9P2W3 67 aa14.08□□□□□ -0.16
NUP50-203ENST00000407019 IGHV3-43A0A0B4J1X8 118 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 UBE2L5PA0A1B0GUS4 154 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 LRRC30A6NM36 301 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 SPINT2O43291 252 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 IGHV3-43DP0DP04 118 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 AGAP20933 346 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 RPS23P62266 143 aaKnown RBP14.07□□□□□ -0.16
NUP50-203ENST00000407019 PAX5Q02548 391 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 ZNF66Q6ZN08 573 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 ZNF429Q86V71 674 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 MBD3L1Q8WWY6 194 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 RAB39BQ96DA2 213 aa14.07□□□□□ -0.16
NUP50-203ENST00000407019 hCG_1809904A0A1W2PP81 198 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 A0A1W2PR64 198 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 A0A1W2PRV1 198 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 OR2C1O95371 312 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 CLDN14O95500 239 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 PRDX2P32119 198 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 EIF2S3P41091 472 aaKnown RBP14.06□□□□□ -0.16
NUP50-203ENST00000407019 BRWD1-AS2P59051 145 aa14.06□□□□□ -0.16
NUP50-203ENST00000407019 EDDM3AQ14507 147 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms