RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CHP2O43745 196 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 REM1O75628 298 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 PTTG1O95997 202 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 APOA1P02647 267 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 CLPSP04118 112 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 IFNA16P05015 189 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 GLAP06280 429 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 EIF4EP06730 217 aaKnown RBP3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 KRTAP1-4P0C5Y4 121 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 CELP19835 753 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 SDC2P34741 201 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 CD79BP40259 229 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 CSNK1A1P48729 337 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 TGM4P49221 684 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 LHX2P50458 406 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 RAB7AP51149 207 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 FABP6P51161 128 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 DEFA1P59665 94 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 DEFA3P59666 94 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 PSPHP78330 225 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 PRR3P79522 188 aaKnown RBP3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 FABP5Q01469 135 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 KIR2DS1Q14954 304 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 GABRA6Q16445 453 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 C2orf83Q53S99 150 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 SMARCD3Q6STE5 483 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF322Q6U7Q0 402 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 C12orf54Q6X4T0 127 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 TMEM91Q6ZNR0 172 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR2W3Q7Z3T1 314 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 ARIH2OSQ8N7S6 290 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF615Q8N8J6 731 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 DUSP18Q8NEJ0 188 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR7G1Q8NGA0 311 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR51L1Q8NGJ5 315 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR51Q1Q8NH59 317 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR51A7Q8NH64 312 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR4C6Q8NH72 309 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 ABHD3Q8WU67 409 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 LRRC29Q8WV35 223 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 SRRQ9GZT4 340 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 RERGLQ9H628 205 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 ABCB9Q9NP78 766 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF229Q9UJW7 825 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 PSG8Q9UQ74 426 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 V9GYH0 126 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 DENND4AQ7Z401 1863 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 MN1Q10571 1320 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 MKI67P46013 3256 aaKnown RBP3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRAV27A0A087WT01 109 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 A0A087WUJ7 227 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGKV3D-11A0A0A0MRZ8 115 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 FABP12A6NFH5 140 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 GABRPO00591 440 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC19A2O60779 497 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR2B3O76000 313 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 NDUFB2O95178 105 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGF2P01344 180 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 IFNGP01579 166 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 CD3GP09693 182 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 IL9P15248 144 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 SPNP16150 400 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF3P17036 446 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 USF1P22415 310 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 F8A1P23610 371 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 LCN1P31025 176 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 CFHR2P36980 270 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 PPICP45877 212 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 EVX1P49640 407 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 GFERP55789 205 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 SYNJ2BPP57105 145 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 VAMP3Q15836 100 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 DEFB133Q30KQ1 61 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 NDUFAF6Q330K2 333 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF791Q3KP31 576 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ORMDL2Q53FV1 153 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 KLHL12Q53G59 568 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC25A25Q6KCM7 469 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 XKRXQ6PP77 449 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 FAM131AQ6UXB0 335 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 C11orf53Q8IXP5 236 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 MKXQ8IYA7 352 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZFP41Q8N8Y5 198 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 GDPD1Q8N9F7 314 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ASCC1Q8N9N2 400 aaKnown RBP3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 SPERTQ8NA61 448 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 CYB561A3Q8NBI2 242 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ATP6V1C2Q8NEY4 427 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR6K6Q8NGW6 343 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR5W2Q8NH69 310 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 TMEM158Q8WZ71 300 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 AP3S1Q92572 193 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 SGTBQ96EQ0 304 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 ERMAPQ96PL5 475 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 TMED9Q9BVK6 235 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC19A3Q9BZV2 496 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR51V1Q9H2C8 321 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 MIXL1Q9H2W2 232 aa3.19□□□□□ -1.9
HMGB3P18-201ENST00000406327 SYNDIG1Q9H7V2 258 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms