RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FAM234AQ9H0X4 552 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 PSG11Q9UQ72 335 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 SPTBN1Q01082 2364 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 PIGBOS1A0A0B4J2F0 54 aa16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 B9A039 149 aa16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 TMEM178BH3BS89 294 aa16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 OMGP23515 440 aa16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 LOXL3P58215 753 aa16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 GPR146Q96CH1 333 aa16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 CALYQ9NYX4 217 aa16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 GNG12Q9UBI6 72 aa16.47■□□□□ 0.23
PDLIM5-205ENST00000380180 F2RL2O00254 374 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 SIGLEC5O15389 551 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 ST8SIA5O15466 376 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 TPT1P13693 172 aaKnown RBP16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 C17orf58Q2M2W7 97 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 BAP18Q8IXM2 172 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 C1orf87Q8N0U7 546 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 TMEM106BQ9NUM4 274 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 JPT1Q9UK76 154 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 TRAV38-1A0A0B4J264 116 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 TMEM8BA6NDV4 472 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 LGALS8O00214 317 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 TMPRSS2O15393 492 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 RRASP10301 218 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 POLR2GP62487 172 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 RPL30P62888 115 aaKnown RBP16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 BTNL3Q6UXE8 466 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 COMMD7Q86VX2 200 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 CXorf58Q96LI9 332 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 SLC25A32Q9H2D1 315 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 SDHAF2Q9NX18 166 aa16.46■□□□□ 0.23
PDLIM5-205ENST00000380180 PPIAL4EA0A075B759 164 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 PPIAL4DF5H284 164 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 TAAR5O14804 337 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 YPEL1O60688 119 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 PPIAL4FP0DN26 164 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 EPHA1P21709 976 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 P2RY1P47900 373 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 TMEM33P57088 247 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 ID3Q02535 119 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 MSMO1Q15800 293 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 IZUMO4Q1ZYL8 232 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 FGFRL1Q8N441 504 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 RNASE11Q8TAA1 199 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 EDARADDQ8WWZ3 215 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 LSM10Q969L4 123 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 YPEL2Q96QA6 119 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 MAGT1Q9H0U3 335 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 C11orf1Q9H5F2 150 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 PPIAL4AQ9Y536 164 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 DOCK11Q5JSL3 2073 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 A0A1B0GU03 582 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 IGKV1-5P01602 117 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 TFF3Q07654 80 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 CLEC9AQ6UXN8 241 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 Q6ZRM9 215 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 PDZD9Q8IXQ8 264 aa16.45■□□□□ 0.22
PDLIM5-205ENST00000380180 TRGV10A0A0A0MS01 117 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 GPR137BO60478 399 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 RAMP3O60896 148 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 PITX3O75364 302 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 NXPH3O95157 252 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 IGHV3-7P01780 117 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 SLC25A6P12236 298 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 LPAR6P43657 344 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 SWI5Q1ZZU3 235 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 GPR157Q5UAW9 335 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 RPL7L1Q6DKI1 246 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 TCF23Q7RTU1 214 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 FBXL17Q9UF56 701 aa16.44■□□□□ 0.22
PDLIM5-205ENST00000380180 KBTBD11-OT1A0A1B0GTJ5 212 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 NKX6-3A6NJ46 265 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 CLDN14O95500 239 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 CLDN1O95832 211 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 ZNF134P52741 427 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 AKR1C2P52895 323 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 CATR1Q13166 79 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 ZNF672Q499Z4 452 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 OR2B11Q5JQS5 317 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 MUC15Q8N387 334 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 BSCL2Q96G97 398 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 SMIM3Q9BZL3 60 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 CLN8Q9UBY8 286 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 SSSCA1O60232 199 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 LOXP28300 417 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 BRWD1-AS2P59051 145 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 Q3ZCU0 254 aa16.43■□□□□ 0.22
PDLIM5-205ENST00000380180 C17orf98A8MV24 154 aa16.42■□□□□ 0.22
PDLIM5-205ENST00000380180 NDUFB7P17568 137 aa16.42■□□□□ 0.22
PDLIM5-205ENST00000380180 PVALBP20472 110 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-205ENST00000380180 GPR12P47775 334 aa16.42■□□□□ 0.22
PDLIM5-205ENST00000380180 LINC00205P59089 165 aa16.42■□□□□ 0.22
PDLIM5-205ENST00000380180 UTF1Q5T230 341 aa16.42■□□□□ 0.22
PDLIM5-205ENST00000380180 TCTEX1D2Q8WW35 142 aa16.42■□□□□ 0.22
PDLIM5-205ENST00000380180 RAB9BQ9NP90 201 aa16.42■□□□□ 0.22
PDLIM5-205ENST00000380180 LINC00473A8K010 186 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 PROP1O75360 226 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 NHLH2Q02577 135 aa16.41■□□□□ 0.22
PDLIM5-205ENST00000380180 ZNF66Q6ZN08 573 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms