RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 SFXN3Q9BWM7 321 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 KPTNQ9Y664 436 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 ARID1AO14497 2285 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 POLEQ07864 2286 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 TRGV8A0A0C4DH27 118 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 FAM157AC9JC47 383 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 AGPAT2O15120 278 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 OMGP23515 440 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 CFHR2P36980 270 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 TCTEX1D1Q8N7M0 179 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 OR2G3Q8NGZ4 309 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 OR1L1Q8NH94 360 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 ATP5SQ99766 215 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 PBDC1Q9BVG4 233 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 UFSP2Q9NUQ7 469 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 COA4Q9NYJ1 87 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 CACNG5Q9UF02 275 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 FAM90A26D6RGX4 464 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 TXNL1O43396 289 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 HBZP02008 142 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 GABRA2P47869 451 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 SULT1A1P50225 295 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 TAS2R30P59541 319 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 COL10A1Q03692 680 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 AESQ08117 197 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 DHRS7BQ6IAN0 325 aaPredicted RBP18.04■□□□□ 0.48
TRIM54-202ENST00000380075 TMEM182Q6ZP80 229 aaPredicted RBP18.04■□□□□ 0.48
TRIM54-202ENST00000380075 RPRMLQ8N4K4 120 aa18.04■□□□□ 0.48
TRIM54-202ENST00000380075 PARP12Q9H0J9 701 aaKnown RBP18.04■□□□□ 0.48
TRIM54-202ENST00000380075 GTF3C1Q12789 2109 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 A0A1B0GW64 132 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 CST7O76096 145 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 IGKV1-5P01602 117 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 IGHV3-13P01766 116 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 ASCL1P50553 236 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 CATR1Q13166 79 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 KRBOX4Q5JUW0 171 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 ZNF474Q6S9Z5 364 aaPredicted RBP18.03■□□□□ 0.48
TRIM54-202ENST00000380075 UBALD1Q8TB05 177 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 FAM216AQ8WUB2 273 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 LRRC29Q8WV35 223 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 MUCL1Q96DR8 90 aa18.03■□□□□ 0.48
TRIM54-202ENST00000380075 SYNGR2O43760 224 aa18.02■□□□□ 0.48
TRIM54-202ENST00000380075 CRYAAP02489 173 aa18.02■□□□□ 0.48
TRIM54-202ENST00000380075 ZNF16P17020 682 aaPredicted RBP18.02■□□□□ 0.48
TRIM54-202ENST00000380075 GUK1Q16774 197 aa18.02■□□□□ 0.48
TRIM54-202ENST00000380075 SMDT1Q9H4I9 107 aa18.02■□□□□ 0.48
TRIM54-202ENST00000380075 MMP24Q9Y5R2 645 aa18.02■□□□□ 0.48
TRIM54-202ENST00000380075 BTBD17A6NE02 478 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 PLA2G2AP14555 144 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 GLRXP35754 106 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 CA7P43166 264 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 ZNF83P51522 516 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 Q6ZRM9 215 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 OR2Z1Q8NG97 314 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 PPP1R35Q8TAP8 253 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 S100PBPQ96BU1 408 aa18.02■□□□□ 0.47
TRIM54-202ENST00000380075 SRRM5B3KS81 715 aa18.01■□□□□ 0.47
TRIM54-202ENST00000380075 TOR1AO14656 332 aa18.01■□□□□ 0.47
TRIM54-202ENST00000380075 H2AFB1P0C5Y9 115 aa18.01■□□□□ 0.47
TRIM54-202ENST00000380075 CEACAM8P31997 349 aaPredicted RBP18.01■□□□□ 0.47
TRIM54-202ENST00000380075 CASP6P55212 293 aa18.01■□□□□ 0.47
TRIM54-202ENST00000380075 DPPA3Q6W0C5 159 aa18.01■□□□□ 0.47
TRIM54-202ENST00000380075 FAM213BQ8TBF2 198 aa18.01■□□□□ 0.47
TRIM54-202ENST00000380075 OR2D2Q9H210 308 aa18.01■□□□□ 0.47
TRIM54-202ENST00000380075 M0R1B8 84 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 EIF4EBP1Q13541 118 aaPredicted RBP18■□□□□ 0.47
TRIM54-202ENST00000380075 TMEM217Q8N7C4 229 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 MRGPRDQ8TDS7 321 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 SCRT1Q9BWW7 348 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 NXPH3O95157 252 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 IFNA5P01569 189 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 ADH4P08319 380 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 PRDX2P32119 198 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 FHITP49789 147 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 KLF3P57682 345 aaPredicted RBP18■□□□□ 0.47
TRIM54-202ENST00000380075 RPS23P62266 143 aaKnown RBP18■□□□□ 0.47
TRIM54-202ENST00000380075 HTD2P86397 168 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 ZNF295-AS1Q8N0V1 137 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 OR52L2PQ8NGH6 319 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 HIPK2Q9H2X6 1198 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 NDRG3Q9UGV2 375 aa18■□□□□ 0.47
TRIM54-202ENST00000380075 C9JQL5 133 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 SPINT2O43291 252 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 NPBWR1P48145 328 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 NKX6-1P78426 367 aaPredicted RBP17.99■□□□□ 0.47
TRIM54-202ENST00000380075 ZNF66Q6ZN08 573 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 FGFRL1Q8N441 504 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 DUSP13Q9UII6 198 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 CCL21O00585 134 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 GLIPR1P48060 266 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 CD177Q8N6Q3 437 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 EIF5A2Q9GZV4 153 aaKnown RBP17.99■□□□□ 0.47
TRIM54-202ENST00000380075 PSENENQ9NZ42 101 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 LAMP3Q9UQV4 416 aa17.99■□□□□ 0.47
TRIM54-202ENST00000380075 ZNF737O75373 536 aa17.98■□□□□ 0.47
TRIM54-202ENST00000380075 HBG1P69891 147 aa17.98■□□□□ 0.47
TRIM54-202ENST00000380075 HBG2P69892 147 aa17.98■□□□□ 0.47
TRIM54-202ENST00000380075 OR13A1Q8NGR1 328 aa17.98■□□□□ 0.47
TRIM54-202ENST00000380075 SNX22Q96L94 193 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms