RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 DOCK3Q8IZD9 2030 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 PRSS1P07477 247 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 SCTP09683 121 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 SOX8P57073 446 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 ZNF324BQ6AW86 544 aaPredicted RBP13.31□□□□□ -0.28
SRPK1-204ENST00000373825 HSD17B10Q99714 261 aaKnown RBP13.31□□□□□ -0.28
SRPK1-204ENST00000373825 TMEM70Q9BUB7 260 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 RSPO3Q9BXY4 272 aaPredicted RBP13.31□□□□□ -0.28
SRPK1-204ENST00000373825 OR1N2Q8NGR9 330 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 SCARF2Q96GP6 870 aaPredicted RBP13.31□□□□□ -0.28
SRPK1-204ENST00000373825 G6PC2Q9NQR9 355 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 ABCA1O95477 2261 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 C17orf51A8MQB3 221 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
SRPK1-204ENST00000373825 ZIC3O60481 467 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 F2RP25116 425 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 CSN1S1P47710 185 aa13.31□□□□□ -0.28
SRPK1-204ENST00000373825 SELENOHQ8IZQ5 122 aaKnown RBP13.31□□□□□ -0.28
SRPK1-204ENST00000373825 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
SRPK1-204ENST00000373825 PRAMEF26H0Y7S4 382 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 OR2J3O76001 311 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 IL11P20809 199 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 NPY1RP25929 384 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 CKS1BP61024 79 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 IBA57Q5T440 356 aaKnown RBP13.3□□□□□ -0.28
SRPK1-204ENST00000373825 PARM1Q6UWI2 310 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 C1orf174Q8IYL3 243 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 TMEM242Q9NWH2 141 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 HIF1ANQ9NWT6 349 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 GTF3C1Q12789 2109 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 MRPL33O75394 65 aaKnown RBP13.3□□□□□ -0.28
SRPK1-204ENST00000373825 TSPOP30536 169 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 SPPL3Q8TCT6 385 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 PAQR4Q8N4S7 273 aaPredicted RBP13.3□□□□□ -0.28
SRPK1-204ENST00000373825 M0R296 226 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 NAPSAO96009 420 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 DEFA4P12838 97 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 TDGF1P13385 188 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 PPP1CAP62136 330 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 OXGR1Q96P68 337 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 DENND4AQ7Z401 1863 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 FANCMQ8IYD8 2048 aa13.3□□□□□ -0.28
SRPK1-204ENST00000373825 OR2T8A6NH00 312 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 CORTO00230 105 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 GPX7Q96SL4 187 aaPredicted RBP13.29□□□□□ -0.28
SRPK1-204ENST00000373825 CD207Q9UJ71 328 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 IGLV1-36A0A0B4J1U3 117 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 BGLAPP02818 100 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 PRR31Q5SQ13 230 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 C20orf144Q9BQM9 153 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 GLRX2Q9NS18 164 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 SHANK1Q9Y566 2161 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 COL5A3P25940 1745 aaPredicted RBP13.29□□□□□ -0.28
SRPK1-204ENST00000373825 SH2D1BO14796 132 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 VENTXO95231 258 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 GPR12P47775 334 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 TMEM97Q5BJF2 176 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 OR2K2Q8NGT1 345 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 ASB10Q8WXI3 467 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 IGKV1D-42A0A075B6H8 117 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 IGKV1D-8A0A087WSZ0 117 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 TRAV9-2A0A087WT02 112 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 LOC389332A0A1B0GUA5 103 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 ZFAND5O76080 213 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 HLA-DRB1P01911 266 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 CA7P43166 264 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 CLDN15P56746 228 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 SRSF4Q08170 494 aaKnown RBP13.29□□□□□ -0.28
SRPK1-204ENST00000373825 ZNF788Q6ZQV5 615 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 OR4S2Q8NH73 311 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 ST8SIA1Q92185 356 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 FGF11Q92914 225 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 ADTRPQ96IZ2 230 aa13.29□□□□□ -0.28
SRPK1-204ENST00000373825 MYOFQ9NZM1 2061 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 FCGR3BO75015 233 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 P04436 131 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 RPL31P62899 125 aaKnown RBP13.28□□□□□ -0.28
SRPK1-204ENST00000373825 MRPS11P82912 194 aaKnown RBP13.28□□□□□ -0.28
SRPK1-204ENST00000373825 ZDHHC23Q8IYP9 409 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 CLEC5AQ9NY25 188 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.28□□□□□ -0.28
SRPK1-204ENST00000373825 A6NCN8 305 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 LINC00869P0C866 280 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 GPR6P46095 362 aaPredicted RBP13.28□□□□□ -0.28
SRPK1-204ENST00000373825 UBE2L3P68036 154 aaKnown RBP13.28□□□□□ -0.28
SRPK1-204ENST00000373825 JKAMPQ9P055 326 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 IGHV3-43A0A0B4J1X8 118 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 LOC107984156A0A0G2JMH3 177 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 CXorf1O96002 111 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 SLC25A5P05141 298 aaKnown RBP13.28□□□□□ -0.28
SRPK1-204ENST00000373825 IGHV3-43DP0DP04 118 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 ARL17AQ8IVW1 177 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 OR10AG1Q8NH19 301 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.28□□□□□ -0.28
SRPK1-204ENST00000373825 SGK494Q96LW2 274 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 IL36RNQ9UBH0 155 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 MYLKQ15746 1914 aa13.28□□□□□ -0.28
SRPK1-204ENST00000373825 EML2O95834 649 aa13.27□□□□□ -0.28
SRPK1-204ENST00000373825 HNRNPA1P09651 372 aaKnown RBP eCLIP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms